Protein Info for MPMX19_00349 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 815 transmembrane" amino acids 307 to 331 (25 residues), see Phobius details PF13401: AAA_22" amino acids 45 to 176 (132 residues), 39.7 bits, see alignment E=1.8e-13 PF12796: Ank_2" amino acids 643 to 724 (82 residues), 48.8 bits, see alignment E=2.5e-16 amino acids 717 to 790 (74 residues), 61.4 bits, see alignment E=3e-20 PF13857: Ank_5" amino acids 648 to 701 (54 residues), 27.8 bits, see alignment 8e-10 PF00023: Ank" amino acids 660 to 690 (31 residues), 15.8 bits, see alignment (E = 4.4e-06) amino acids 693 to 724 (32 residues), 17.6 bits, see alignment (E = 1.2e-06) amino acids 726 to 754 (29 residues), 22.6 bits, see alignment (E = 3.1e-08) amino acids 759 to 790 (32 residues), 29.4 bits, see alignment (E = 2e-10) PF13637: Ank_4" amino acids 701 to 747 (47 residues), 26.4 bits, see alignment 2.1e-09 amino acids 731 to 780 (50 residues), 36.5 bits, see alignment 1.4e-12 amino acids 764 to 812 (49 residues), 37.5 bits, see alignment 6.3e-13 PF13606: Ank_3" amino acids 759 to 787 (29 residues), 19.7 bits, see alignment (E = 2.7e-07)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (815 amino acids)

>MPMX19_00349 hypothetical protein (Azospirillum sp. SherDot2)
MDRSAPKHSSRARRAAPGHHDPVSESAGATAAEIRDGLVLAFLARKRLLVLVGDAGSGRP
ALFRQLVEHVEADGAMALPVAASVGSEVEDLVAAAGTGALPDLVPGEDGETDFDALIAAL
EERLELAGSGLLAVDNAAVLAPPVLADLVDLTRAETPAGRFMQVLLCGTPELEGTLARAG
LTDELRDMGVIYRMTAGGGFVDDVREPAPAPQPVPRPAPHPGPMLAVPPQPQPQQVPVQS
AAIPPANDWSVGQRREHLPQEERWQGDQGWTDRGAGPMAGPMAGAEGQGWSPDGGQAGAM
RAPRRTALYAGAALTTLVLLGAAGAAIATAMPGAFPDRALAMVEESWAKARDAVERTVQG
LTGAAAPAEQQHAVTVPVAPAPEMRVSPAVAPATAPTAPTTQTAVQAPAAPPPAAAGTQT
VSKPATLASTTVPTAAAPVETAALPPAQAQPSAAKASATGNTEAAPGVASLPPLEDPSTT
AAVPPAPQPAVPDADTAQRVRTMVDQARRQIAGKRLTTPPGDNAYETVQRIRQIAPSSPE
AAELLTTMTDTYRRWAMLAERDGDWSETKRFYERAQMIAPESPDLAERIRAASEQRVYTG
PSVGPATGTAVGTVPGSSAAPVNATPGLGDRESVLALLRNPAELSRTLQAGASADTRLDN
GKTLLMIAAEQGLADAVRVLLDRHARTDLRTSDGATAVMYAAWGGHDGVVRALAEGGADL
DTTNSDGKTALMAAAARGHQEVARTLIQRGVMVDRTTAYGWSALMYAANNGHEAVAKLLL
DSGANPYRMDANGNSALTLGALQGHVQVVEALKPR