Protein Info for MPMX19_00307 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 930 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details transmembrane" amino acids 113 to 131 (19 residues), see Phobius details amino acids 142 to 162 (21 residues), see Phobius details amino acids 182 to 204 (23 residues), see Phobius details amino acids 211 to 242 (32 residues), see Phobius details amino acids 254 to 274 (21 residues), see Phobius details amino acids 279 to 297 (19 residues), see Phobius details amino acids 309 to 328 (20 residues), see Phobius details amino acids 360 to 378 (19 residues), see Phobius details amino acids 384 to 400 (17 residues), see Phobius details amino acids 407 to 426 (20 residues), see Phobius details amino acids 455 to 477 (23 residues), see Phobius details amino acids 484 to 505 (22 residues), see Phobius details amino acids 511 to 530 (20 residues), see Phobius details amino acids 541 to 561 (21 residues), see Phobius details amino acids 567 to 583 (17 residues), see Phobius details amino acids 595 to 613 (19 residues), see Phobius details amino acids 620 to 639 (20 residues), see Phobius details amino acids 651 to 672 (22 residues), see Phobius details amino acids 687 to 706 (20 residues), see Phobius details amino acids 718 to 739 (22 residues), see Phobius details amino acids 756 to 774 (19 residues), see Phobius details amino acids 781 to 801 (21 residues), see Phobius details amino acids 821 to 840 (20 residues), see Phobius details amino acids 849 to 867 (19 residues), see Phobius details amino acids 874 to 893 (20 residues), see Phobius details PF10101: DUF2339" amino acids 111 to 896 (786 residues), 387.6 bits, see alignment E=7.4e-120

Best Hits

KEGG orthology group: None (inferred from 82% identity to azl:AZL_005020)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (930 amino acids)

>MPMX19_00307 hypothetical protein (Azospirillum sp. SherDot2)
MEFVVLLLIFGFLTHRLDRRLKAQAAEIALLRGRLDKALSGGLPPQAAAEAEPAEAAVPE
VEAPPEAVGEPVFASGAEEPVPPPTPQTTPQPAAPAAARTGWRELEDSLASRWLIWLGGG
TMALAAAFFIKLSVDHGWLGPSVRVALGLLAGLGLMVGGEWLRRRPMQRAVAALQPDYVP
PALTAAGLFTAFISVYGGFALFGLFDPLVAFVLLAGLSLAAIGLSLLQGPLIAALGLLAG
YVSPLLVSTGNPDAWSLFAYLLALNGAGMGVVLYRGWRWLGWGALAGAALWPLLWMIDPW
RSGDELPTGVYLLLTSALFLVPAVRGVLDLTLPEPSPATGWRTALPDWARRKQRHPADRL
AMTATTVFGVLVAAVTWIDSHGSVSLIVLGLFALLAMIGGRRTERIAGVAWIAALSVLLS
LAPWSLPYVPASPPPLNADGQPLIVVDPAGYPAAVAHFLWIAGGFAALFGIGGFVALWDA
RRAALWASISALVPLALLTLAYALVEPPETAIGWPAAALGLAALLVGATTPLGRHRHRPG
ASLGLAAFAAGATGAIALGATMVLQEAWLTVALAMQVPVLAWLERQLSLRELRGVTLLVA
VAVLVRLAINPSVLDYEGYGWIAYGYGLPALGFLVAARWMRTAPGGKGDDLVVMVLEAGA
LIFTTLMLSLGIHRWMAGSLQVAPSSLAEVALHTLSWLGLALLLAADRRWSARPVAVWGR
RFLVLMAATAALFLHLLALNPLWNDEWVGNWPVVNRLLLAYGAPALLGLVYLWYDPPPST
ALRSAAPVLPLLLIATNLALEIRRSFQGPVLSGYEMSDAEWYSYSAGFLLFAVAMLVAGI
RFGWGWMRHAGLVLVLAVVAKVFLSDMSDLEGMYRVASFLGLGLCLVGTGWLYQRLLRPP
APGTPPDAPPELPLEPPLSPTDTLLDQRTH