Protein Info for MPMX19_00162 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 551 PF05876: GpA_ATPase" amino acids 1 to 184 (184 residues), 108.6 bits, see alignment E=4.3e-35 PF20454: GpA_nuclease" amino acids 195 to 482 (288 residues), 231.1 bits, see alignment E=1.8e-72

Best Hits

Predicted SEED Role

"Phage terminase, large subunit"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (551 amino acids)

>MPMX19_00162 hypothetical protein (Azospirillum sp. SherDot2)
MLRDTPVLKPLMRPTRKGEKQDNATFYQLSNGASVRVVGAASDDAFRRYSARFLFADEID
GDGWTPGAKTQGDKLKLFWTRGETFWNRKQVRGSTPLLYETSRVWKLWLASDQRRYFVPC
PQCSDAAGQLDGWQYLDWGGPDVPHGLKWSLDAEGTLDKVWYVGTCGCIVEERHKAWMDA
NGEWRPTARAKVPGHVGMHLWTGMSLNPNAAWTVIVQEWLEAQADPASLVQPFMNLRLGR
PYRAIYGQEVKSSSFIDRMEPYPAEVPAGVEFITVGVDVQSGKVNPRLEASVYGWGRGLE
VWLIGHFVLAGDPAKGEVWAALDEGVLLRRFRKPDGTTLDVRATCIDSGGHHTQEVYAFA
NKRRSRRVWAIKGRSESRGQRAKVWPRKPSSKLGHVWYMIGGNAARDWAYGSLAVDKIGP
RHVHFPQAAIDGARELDDEFFAQLTREKLIVPRGQQYTVWVKPSEAHEAGVCFVYAYAAV
CGLQALSGKYVKLGEAEVDAAPAEASSDTDTEPTPADAIAAAVARARRLSQPAVAVQPAP
PSSTDKGELYL