Protein Info for MPMX19_00007 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 841 PF22527: DEXQc_Suv3" amino acids 18 to 150 (133 residues), 92.3 bits, see alignment E=2.4e-30 PF00271: Helicase_C" amino acids 178 to 276 (99 residues), 35.9 bits, see alignment E=7.6e-13

Best Hits

KEGG orthology group: None (inferred from 94% identity to azl:AZL_026640)

Predicted SEED Role

"ATP-DEPENDENT DNA HELICASE"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (841 amino acids)

>MPMX19_00007 hypothetical protein (Azospirillum sp. SherDot2)
MTSTHASAGGGLGRGGRVVAVLGPTNTGKTYLAIERMLGHRSGMIGFPLRLLARENYDRI
VSIKGKNAVALVTGEEKILPPNPSYWVCTVESMPLDRAVDFLAVDEIQLCADPERGHIFT
DRLLNARGMVETMVLGSDSMQPMIRRLVPKAEFISRPRFSQLTYAGHKKLTRLPPRSAVV
AFSATDVYAIAEMIRRQRGGTAVVLGALSPRTRNAQVGLYQAGEVDYLVATDAIGMGLNM
DVDHVAFARIVKFDGFAPRRLRPAEVAQIAGRAGRHMRDGTFGTTDEVGELDADLVTRVE
NHEFETVKALSWRNSDLRFDTPGFLLKSLEERAPLAELSRVREADDHLALQALVRDPEIM
DLARGRDAVKLLWEVCQVPDFRKVLSDAHTKLLGQIFRSLRAPLRRLDDDWVAKQIARLD
RTEGDIDALVARIAHIRTWTYISNRPTWLKDPLHWQERTRAIEDRLSDALHERLTQRFID
RRSATLARTLKDGRSLLGGVRADGEVVVEGHVVGKLEGFRFVPDAPDRSDEAKSLLTAAR
RALRDELAKRLRAFEAEPDDAFALGADGVLSADTLPVARLAAGQSVLAPLVVPFDDGMLD
QAQRERVRARLERWLKDHVAARLKPLFALSAAQGLSGAGRGLAFQLVEGLGVLPRQPVAD
MVERLEREDRKALTGLGVRLGVSHLYLTALAKPAAVTLRGLLWAVSKGHPLPVPIPPPGR
VSVEAPSVKEGGAPPGFWEAIGYPLAGGRALRVDMLDRLETELLTASRANAPIREVALGQ
RVGLSAEELAAVLTGLGYVRTEGEDGAVTWKRKRPQGNRQRREKPTNEDHPFAKLRQLSG
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