Protein Info for MIT1002_03038 in Alteromonas macleodii MIT1002

Annotation: Cation efflux system protein CusA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1091 transmembrane" amino acids 12 to 31 (20 residues), see Phobius details amino acids 345 to 361 (17 residues), see Phobius details amino acids 368 to 387 (20 residues), see Phobius details amino acids 393 to 414 (22 residues), see Phobius details amino acids 486 to 506 (21 residues), see Phobius details amino acids 524 to 545 (22 residues), see Phobius details amino acids 572 to 593 (22 residues), see Phobius details amino acids 917 to 936 (20 residues), see Phobius details amino acids 943 to 963 (21 residues), see Phobius details amino acids 969 to 993 (25 residues), see Phobius details amino acids 1031 to 1049 (19 residues), see Phobius details amino acids 1062 to 1087 (26 residues), see Phobius details PF00873: ACR_tran" amino acids 6 to 1086 (1081 residues), 764.8 bits, see alignment E=6.6e-234

Best Hits

Predicted SEED Role

"Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1091 amino acids)

>MIT1002_03038 Cation efflux system protein CusA (Alteromonas macleodii MIT1002)
MIESVIRWSVNNRILVLLSAIMLSIAGFWAVKNTPVDAIPDLSDVQVIVKVNYPGQSPQV
VEDQVTFPLTSALMSVPGAQTVRGYSFFGDAYVYIIFDDDTDMYWARSRVLEYLSQASSQ
LPEGVTPQLGPDATGVGWVYIYALENDASQPNALDAGELRALQDWFLKFELQSVEGVSEV
ASIGGMVKQYQVIVDPEKLRAYNIQPSMIEIALKRGNRASGASVIEMAEAEYMVSAQSYI
QGIDDILSLPTGVIKDGVSITINDVAQVVESPLMRRGIAELNGNGETVGGIIVMRYGENA
KATIDAVKAKLDSLKASLPEGVNIVPVYDRSTLIDKSVDTLTNKLVEELLVVGLVCAIFL
FHLRSSMVALISLPIGILAAFIVMKLQGLNANIMSLGGIAIAIGAMVDGAIVVVENLHKH
LHQHAVSSSQGASAHQVRAASQGASASQRVSGSAQSRTSIPASAPTSAKLSAAKRWELVI
KSTTEVGPALFFALLIITVSFIPVFALEAQEGRLFAPLAFTKTYAMAAAAALAITLVPVL
AGYFVRGKIRSEAQNPVNRALERVYQPLLTRLLNYPLLTLAGAFCLLLSMYWPLSQLGSE
FMPELDEGDLMYMPTTYPGISVGKARELLQQTDKLIATLPEVETVFGKIGRADTATDPAP
LTMIETFIQLKPKAQWRAGMTTEKLKEELNALVQFPGLTNAWVMPIKTRIDMLATGIKTP
VGIKIAGPDLAGIEAIGKDIEILLKDLPNTASVYAERVVGGRYVYIDIDRQLAARYGMTI
DDVHSIVGSAVGGKVVTQSVEGRERFPIAMRFLQHYRDTPESLASMPFVTPSGVHITLGD
VATVRIDDGPAGIKSENARLNGWVYIDISSDSATGIDLGGYVDSAKRHLSEQLDLPTGYS
ITWAGQFAYLERAKAKLSVVIPLTLAIICLLLYLAFKRLRDVALILATLPLALVGSVWLL
YLLNFNLSVAVGVGFIALAGVAVEIGVIMLVYLNQYVSDALTKHETENGNTKKDALVKKA
IVHAASARLRPVMMTSLSIIVGLLPVLYATGTGSEVMQRIAAPMVGGMASALVLTLLVLP
SAFYLIVSRKK