Protein Info for MIT1002_02550 in Alteromonas macleodii MIT1002

Annotation: putative ABC transporter ATP-binding protein YlmA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00005: ABC_tran
  • amino acids 34 to 164 (131 residues), 45.3 bits, E=2.1e-15
  • amino acids 295 to 447 (153 residues), 82.8 bits, E=5.6e-27

Best Hits

KEGG orthology group: K05776, molybdate transport system ATP-binding protein (inferred from 88% identity to amc:MADE_01177)

Predicted SEED Role

"Putative molybdenum transport ATP-binding protein modF"

Protein Sequence (497 amino acids)

>MIT1002_02550 putative ABC transporter ATP-binding protein YlmA (Alteromonas macleodii MIT1002)
MLYLSEFQIKLSNQYITPAFSLALCTESAPSHFLIAGRNSSGKSLLISALAGNGKVASGS
RECTSVVAEVSVFKQQAIIEEEKQKDSADILDVIAEPTQVRELFAQTNEDYKNHPYYDEL
ASALRIEHLLDNAFLSLSTGETRKIIIMLAWLSNASIILLDEPFEGLDVEAISAFSRFLV
SQQQASLVLTANKLADIPKNIEAQLIVMDDLAITWKSEDKLNYDGLRSELSTWFALESDD
IDVPSALNAKDKHGDDPNRNDQSRNVQNSELDSLPHTLIQLKDGFVRFDERTVFEQLNFT
LNKNEHWQITGPNGSGKTCLLQMFTGDNSHCYTNDLTMFGIKRGTGESIWDIKKHIGIMS
NALHMQYKVNASVEHVIISGFHDSIGLYTRPTLAERMVAEQWLEVLGLKQKKNSPFQSLS
FGDQRLVLIARSMVKHPAVLILDEPCNGLDDFNRQKALKLIDILARAGTSTLLYVNHHEE
ERIPSIHNTLNMKDYNV