Protein Info for MIT1002_02509 in Alteromonas macleodii MIT1002

Annotation: putative acrylyl-CoA reductase AcuI

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 329 TIGR02823: putative quinone oxidoreductase, YhdH/YhfP family" amino acids 5 to 329 (325 residues), 451.9 bits, see alignment E=4.8e-140 PF08240: ADH_N" amino acids 31 to 117 (87 residues), 52.4 bits, see alignment E=5.7e-18 PF00107: ADH_zinc_N" amino acids 162 to 273 (112 residues), 54.8 bits, see alignment E=9.8e-19

Best Hits

Swiss-Prot: 49% identical to YHFP_BACSU: Putative quinone oxidoreductase YhfP (yhfP) from Bacillus subtilis (strain 168)

KEGG orthology group: None (inferred from 89% identity to amc:MADE_01969)

MetaCyc: 45% identical to acryloyl-CoA reductase monomer (Ruegeria pomeroyi DSS-3)
RXN-9087 [EC: 1.3.1.84]

Predicted SEED Role

"Alcohol dehydrogenase (EC 1.1.1.1)" in subsystem Fermentations: Mixed acid or Glycerolipid and Glycerophospholipid Metabolism in Bacteria (EC 1.1.1.1)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.1.1.1

Use Curated BLAST to search for 1.1.1.1 or 1.3.1.84

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (329 amino acids)

>MIT1002_02509 putative acrylyl-CoA reductase AcuI (Alteromonas macleodii MIT1002)
MTSFKALLVEKQEDKSFTRSITERSLDDLPDGTLLIKVEYSSLNYKDALSATGNPGVSSN
FPHTPGIDAAGTVVSCGDNRFKEGDEVIVTGFDLGMNTAGGFGEYIRIPSEWAVAKPNGL
TLRESMIIGTAGFTAGLSVQGLVEHGVTPDKGDILVTGATGGVGSVAVALLAKAGFSVVA
CTGKKEHEAFLKALGASKVITRDELLENKERPMLKELYAGAVDTVGGEYLAQAIKATQYG
GSVTCCGLTASADLNVSVFPFILRGVSLLGIDSVQCPMPPRLRLWDKLASEWKLDCLDDL
TEEVSLDDVSQKIDAILRGELSGRTLVKL