Protein Info for MIT1002_02102 in Alteromonas macleodii MIT1002

Annotation: maleylacetoacetate isomerase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 211 PF00043: GST_C" amino acids 102 to 175 (74 residues), 41.7 bits, see alignment E=1.7e-14 PF13410: GST_C_2" amino acids 109 to 170 (62 residues), 26.7 bits, see alignment E=7.1e-10 PF14497: GST_C_3" amino acids 115 to 176 (62 residues), 28.1 bits, see alignment E=3e-10

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (211 amino acids)

>MIT1002_02102 maleylacetoacetate isomerase (Alteromonas macleodii MIT1002)
MNLLEHVSTPIIESSIICEYLEDAYPEVSFRPNDPILKSQMRFWMKHVDVKLHPSCGAIQ
WPMIMRDSMLKRSEDERNVLLSKIPEKPRRERQKRLIQYGLDAPDVSDAVKTYYKTIVDM
EKALSQHKWLVGNEFSLADICVSPYFQTLHQFEWTGIYEEKFPKVTQWYANCRARQSYKE
AVIAEVPQSTFEALGRKGRESWPKIKLHLPS