Protein Info for MIT1002_02081 in Alteromonas macleodii MIT1002

Annotation: Antibiotic biosynthesis monooxygenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 191 transmembrane" amino acids 123 to 144 (22 residues), see Phobius details amino acids 150 to 169 (20 residues), see Phobius details PF03992: ABM" amino acids 7 to 80 (74 residues), 33.7 bits, see alignment E=1.7e-12

Best Hits

KEGG orthology group: K09932, hypothetical protein (inferred from 36% identity to dmr:Deima_2732)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (191 amino acids)

>MIT1002_02081 Antibiotic biosynthesis monooxygenase (Alteromonas macleodii MIT1002)
MVENKEPITVIISRRVKPEMVKEFESLTSEMTERASRFPGYLGTTLFKPSSSIDPEYRIM
FKFQDMNSLQEWEGSSQRAEILEKIEDLLITTSEREQVSGLITWFTLPSTNPITPPPRYK
MSLISWLALYPAVPLIFWLFESWLIEFPMFIRTFMVTALVIVLMTYLLMPFMTKRFAFWL
YPKSTPEDSDV