Protein Info for MIT1002_00083 in Alteromonas macleodii MIT1002

Annotation: putative methyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 190 PF03848: TehB" amino acids 12 to 117 (106 residues), 28.1 bits, see alignment E=3.4e-10 PF13489: Methyltransf_23" amino acids 18 to 133 (116 residues), 50.8 bits, see alignment E=4e-17 PF13649: Methyltransf_25" amino acids 26 to 121 (96 residues), 46.2 bits, see alignment E=1.6e-15 PF08242: Methyltransf_12" amino acids 27 to 123 (97 residues), 41.4 bits, see alignment E=4.9e-14 PF08241: Methyltransf_11" amino acids 27 to 125 (99 residues), 45.6 bits, see alignment E=2.3e-15

Best Hits

KEGG orthology group: None (inferred from 47% identity to sbm:Shew185_2240)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (190 amino acids)

>MIT1002_00083 putative methyltransferase (Alteromonas macleodii MIT1002)
MKQYDSVPFETVHKDWLKAIPKEGMVLDVGAGSGRDARYLAAKGLSVVAVEPAVGIREIA
QEYTVANPIHWLSDSLPELTEVFRLQTKFDLILLSAVWMHITPSERERSFRKLSSLLKPS
GKLVISLRHGSCADERTMYPVSADELAKFASQFGLSYRLLTPEKSNDELGRADVQWQTVL
LTQHEKDSRA