Protein Info for MCAODC_20670 in Escherichia coli ECRC101

Name: udk
Annotation: uridine kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 213 TIGR00235: uridine kinase" amino acids 5 to 213 (209 residues), 326.1 bits, see alignment E=4.2e-102 PF00485: PRK" amino acids 10 to 199 (190 residues), 158.5 bits, see alignment E=2e-50

Best Hits

Swiss-Prot: 100% identical to URK_ECO57: Uridine kinase (udk) from Escherichia coli O157:H7

KEGG orthology group: K00876, uridine kinase [EC: 2.7.1.48] (inferred from 100% identity to eco:b2066)

MetaCyc: 100% identical to uridine/cytidine kinase (Escherichia coli K-12 substr. MG1655)
Uridine kinase. [EC: 2.7.1.213, 2.7.1.48]; 2.7.1.48 [EC: 2.7.1.213, 2.7.1.48]; 2.7.1.48 [EC: 2.7.1.213, 2.7.1.48]; 2.7.1.48 [EC: 2.7.1.213, 2.7.1.48]

Predicted SEED Role

"Uridine kinase (EC 2.7.1.48) [C1]" (EC 2.7.1.48)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.1.213 or 2.7.1.48

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (213 amino acids)

>MCAODC_20670 uridine kinase (Escherichia coli ECRC101)
MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEE
RVKTNYDHPSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTRMKETVTVEPKKVIILEGI
LLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFI
EPSKQYADIIVPRGGKNRIAIDILKAKISQFFE