Protein Info for LU632_RS19125 in Erwinia tracheiphila SCR3
Annotation: hypothetical protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
No protein families (PFam or TIGRFam), signal peptides, or transmembrane helices were found in this protein.
Best Hits
Predicted SEED Role
"FIG00967561: hypothetical protein"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (2430 amino acids)
>LU632_RS19125 hypothetical protein (Erwinia tracheiphila SCR3) MKISSVNLNTLSTNRSFPEEDPLRNTGEQPAGSTGPRCNERQPAKRRRVEQDEPRTVLQR SELLYKNAQTGTSGGAGGRDVQQQPAIPPHRRNKLTDRHRTGPHPDRMPADVSASTSHSG PQRTGYGWESPLAEQKFDRAARKRPREEQESYRQSKRPVHGMELTVAELRRAEHQLDPAA KKQLKTQREQYRKWLSEPNQTAQNHNAALCVSMARKNALAHHIRCGLALPFLDENANAQT NAQWLDKYLRMIASARRATGADLTHSDLDRCTEVAAQYLYKTGWFGGASLKQLAHLGNKL SKHPNQQACMDAIAWIAEQLRQADDLSGLGDIHSVLLLNAFTKNFNSGRCERAVARLARH LQRNHQVRPSLDARNIGLVLNAFSKWSDNTDCQSMAYLLADMLVSNSRLRHAMDGQCVTL TLNALSKWPDRPDCADAASALALRLASDRKLRNVLNPQEFGNTLSALSKWPDRPDCADAA SALASRLASDRGLRNALDPQGVANALNALSKWPDTPQCADAATALTSRLADERSLCNALD PQGVANALNALSKWPHMPDCADAATALASRLADERSLRNALDPQELANALNALSKWPDRP DCADAATALASRLASDRGLRNALDPQGVANALNALSKWPHTPQCADAATALASRLADERG LRNALKPQELAAALNALSKWPDTPHCADAATALTSRLASDPGLCDTLNPQGVANALNALS KWPDRPDCADAASALALRLASDRKLRNVLNPQEFGNTLSALSKWPDRPDCADAATALASR LADERGLRNALSPQELAAALNALSKWPDRPDCADAASALASRLASDRGLRNALDPQGVST ALNALSKWPDAPHCTAAATALASRLASDRGLRNALDPQGVSTALNALSKWPGRENCANAA SALASRLADERGLRNALDPQGVANTLNALSKWPDAPQCAAAAAALASRLASDRGLRNALN PQGVATALNALSKWPDAPQCADAATALAPRLANERGLRNALKPQELATALNALSKWPDAP QCADAAAALAPRLADERGLRNALDPQGVANTLNALSKWPDTPNCADAASALASRLAEDHD LRQAMDKRHVAVSLNALSKCLGRSACQSAALLLVERVGSAALPWQQFGAREIPMVANAIS RLLHLDEEQFQTLGRAKLQAMAGHLELHPRFESASAQYIGMLFKALSSAQLHRQMRPLAR QALERVAVLAQNDGLRETNLESLGSLCMGLLPLIRSPELTSRHRRHALRVFNTLQPIVGR KIDLYLSGGVPQSSTDPEQYTTRCPALTFFQVLKAYTMVSRQCKPRHVEGSRQEIRQRRE ELGKWVDSTLERTRAAIEGDLGEMSWNLIAQIEAGDLVFDALDLRMAKEAPKITQAYPPS QFDLGAGLLSMRSAPGELVAPPPGNGSTTHIVVDLHGREVSSNATETNKPYSLFTRLTGL PLVEVQLPGAISTFMLARTLTYKDEPWRFDMFGGSRATRGRMSPAQLLSGGTSGAPSLLP AIRYSDTSPGSPLMQLIARLAPQREDWSRMQRSLLEMVSADHVIEGTLRLGFFEDVSGTA HPFKPTAPDGHALALCPNDGCGFLKLEVALRIPAFREYFTAWQAVQAGEASQEQRDLIAR DKGPTRMAPQALQHFPRDEATLQEAHDAMQRRLQALPSGLSQLTLYELATGGGYQGQRVR AVPAADDKVHLPSQRSQAFDAAGGALLIGKPPYDKENLLPVPEERVSTVAQGDATAEFLS QSFGIQYSYTGFNDGSGSDAEMLHSKGMLIVVPSKNWPADFEDMDLACSKEDLKTLSRWT TGRDRGAVPQEMLSTGSLRLKDIVEPGRMGALPIPELRKRNMDTDGDDAFVYAGYPRLAA LISREMADRELRRGQPRSFKPPKTATPAIDPDSGHYQAGRLSEIMALQRGGRIMGAASTL AARFMAQPDHLREAMARNMMFGTYDGIERDLRNGLRVALDGKARDPRVLKELRNQAHNAI GRAHQPEAREAAKLLHEQLLRLEQGTSLRADAPLLPDALGEAFPSLAQAYLAAPDTEARI HAIIDNYPVCRLSHTQFPDGQPGLIHGEPELSMRNLFTIAIKVGTDALKSDTGTALFAKI VESCERSERGFADRVRSVPYGKVTARDMHDGRFDAEQTRVHLQNIPTMAAGVMQDALHSL QQAGLLAPPPPPAERLRTVQPEDIALEAQALLMHAREMEPEVTHMLKRVAESHAGQLVGM DHQLKSVSSLKEKLKQQMALKNKTLEDAVAGVNDALRYSVVLEPPDFTAGLRGVLASLDD QGHGRVKLNNLFAKHRPAFKAVNVTLRSPEGALWEIQFHTPDTFKLKEQFHNLYKRNHAL QLQGASLAEQQEVQAPARDAFRLVPSPPECDEIDDWEEENVPALAMTAPAFKSKPGNNKD AAESRAGMSGVRGAMEQRTDLRRMAVRHSS