Protein Info for LU632_RS02390 in Erwinia tracheiphila SCR3

Annotation: sugar porter family MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 transmembrane" amino acids 27 to 52 (26 residues), see Phobius details amino acids 61 to 82 (22 residues), see Phobius details amino acids 94 to 113 (20 residues), see Phobius details amino acids 119 to 140 (22 residues), see Phobius details amino acids 152 to 174 (23 residues), see Phobius details amino acids 185 to 205 (21 residues), see Phobius details amino acids 263 to 289 (27 residues), see Phobius details amino acids 303 to 326 (24 residues), see Phobius details amino acids 335 to 356 (22 residues), see Phobius details amino acids 369 to 394 (26 residues), see Phobius details amino acids 406 to 426 (21 residues), see Phobius details amino acids 432 to 454 (23 residues), see Phobius details TIGR00879: MFS transporter, sugar porter (SP) family" amino acids 14 to 468 (455 residues), 374.8 bits, see alignment E=3.1e-116 PF00083: Sugar_tr" amino acids 28 to 470 (443 residues), 371.9 bits, see alignment E=4.9e-115 PF07690: MFS_1" amino acids 33 to 377 (345 residues), 102.4 bits, see alignment E=2.5e-33 amino acids 282 to 467 (186 residues), 41.6 bits, see alignment E=7.9e-15

Best Hits

KEGG orthology group: None (inferred from 88% identity to eae:EAE_09835)

Predicted SEED Role

"Major myo-inositol transporter IolT" in subsystem Inositol catabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (500 amino acids)

>LU632_RS02390 sugar porter family MFS transporter (Erwinia tracheiphila SCR3)
MTKEQYLTLNKASGPNSDAPTSPFVKVVALIVTLGGLLFGYDTGVISGALLFMGKELHLM
PFTTGLITSSLLFGAAFGALLSGHLAAAAGRKKIILWLAVIFAVGAVGTSLAPDLNWMVF
FRLVLGVAVGGAAATVPVYIAEMAPANKRGQLVTLQELMIVSGQLLAYISNAAFHEIWGG
ESTWRWMLVVATLPAVLLWVGMMFMPDTPRWYVMKGLYAQARSVLERARRKEDVEWELME
ITETLDEQSTLGKPRLRELMKPWLFKLFLIGIGIAVIQQLTGVNTIMYYAPTVLTSVGMS
DNAALFATIANGVVSVLMTFVGIWMLGKIGRRTMVMIGQFGCTACLIFIGVVSYIFPETV
NGQPDALRAYMVIAGMLMFLSFQQGALSPVTWLLLSEIFPTRLRGIFMGGAVFAMWIANF
IISLFFPMLLAWIGLSGTFLIFAVVGLFGAFFVIRCVPETRHRSLEQIEHYLQDWLDTGH
GKASRAEHKSGHAVLGKFRP