Protein Info for KEDOAH_05595 in Escherichia coli ECRC99

Annotation: DUF2544 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 280 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details PF11245: DUF2544" amino acids 56 to 280 (225 residues), 255.8 bits, see alignment E=2.1e-80

Best Hits

KEGG orthology group: None (inferred from 100% identity to etw:ECSP_3207)

Predicted SEED Role

"Uncharacterized protein YadU in stf fimbrial cluster"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (280 amino acids)

>KEDOAH_05595 DUF2544 domain-containing protein (Escherichia coli ECRC99)
MKKWTIFLTSLILLALSLETPKCYAGDKLMSASFSSTKIYYAMKNVTASGSLYFYVTVVT
PGEVSYGQYNSNARKGDTLKLISWSGSGPAPTLVLTDYRRTDTSNCPGINTRVFVCAYMT
FNVTVESDNYGCPWIASFYSVSEAFGFGTYTSPTVHDSICPTIPVASFDISWSDNYVSHN
KALRLQSDGSTITTTLSTYLMESGKLCDGSIFDSRGAYCRAVSDLLTFTSYGCDNAKVTV
TPSRQPLTDRKLHDIVVQVNTSSREPIDSTCRFQYVLNEL