Protein Info for HMPREF1181_RS02900 in Bacteroides stercoris CC31F

Annotation: CYTH domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 156 PF01928: CYTH" amino acids 3 to 135 (133 residues), 56.5 bits, see alignment E=1.7e-19

Best Hits

Swiss-Prot: 55% identical to 3PASE_CLOTH: Inorganic triphosphatase (Cthe_2577) from Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372)

KEGG orthology group: None (inferred from 84% identity to bfs:BF0324)

Predicted SEED Role

"FIG00937621: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (156 amino acids)

>HMPREF1181_RS02900 CYTH domain-containing protein (Bacteroides stercoris CC31F)
MPQEIERKFLVKGEYKSQAYSQDRIIQGYISSARGRTVRVRIRGGQGYLTIKGASDASGI
SRYEWEKEIPLNEAEELMKLCEPGVIDKTRYLIRSGNHVFEVDEFYGENEGLVVAEVELA
SENEPFEKPDFIGQEVTGDIRYYNSQLMKHPFKEWK