Protein Info for HEPCGN_04620 in Escherichia coli ECOR38

Name: torY
Annotation: Cytochrome c-type protein TorY

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 366 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details PF03264: Cytochrom_NNT" amino acids 7 to 174 (168 residues), 228.2 bits, see alignment E=1.7e-71

Best Hits

Swiss-Prot: 97% identical to TORY_ECOLI: Cytochrome c-type protein TorY (torY) from Escherichia coli (strain K12)

KEGG orthology group: K07821, trimethylamine-N-oxide reductase (cytochrome c) 2, cytochrome c-type subunit TorY (inferred from 100% identity to ect:ECIAI39_1176)

Predicted SEED Role

"Cytochrome c-type protein TorY" in subsystem trimethylamine N-oxide (TMAO) reductase

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (366 amino acids)

>HEPCGN_04620 Cytochrome c-type protein TorY (Escherichia coli ECOR38)
MRGKKRIGLLFLLITVVVGGGGLLLAQKALHKTSDTAFCLSCHSMSKPFEEYQGTVHFSN
QKGIRAECADCHIPKSGMDYLFAKLKASKDIYHEFVSGKIDSDDKFEAHRQEMAETVWKE
LKASDSATCRSCHSFDAMDIASQSESAQKMHTKAQKDGETCIDCHKGIAHFPPEIKMDDN
AAHELESQAATSVTNGAHIYPFKPSRIGELATVNPGTDLTVVDASGKQPIVLLQGYQMQG
SESTLYLAAGQRLALATLSDEGIKALTVNGEWQADEYGNQWRQASLQGALIDPVLADRKP
LWQYAEKLDDTYCAGCHAPIAADHYTVNTWPSIAKGMGARTSMSENELDILTRYFQYNAK
DITEKQ