Protein Info for HEPCGN_03690 in Escherichia coli ECOR38

Annotation: Tellurite resistance protein TehB

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 217 PF13489: Methyltransf_23" amino acids 33 to 163 (131 residues), 34 bits, see alignment E=4.8e-12 PF03848: TehB" amino acids 34 to 149 (116 residues), 24.5 bits, see alignment E=3.4e-09 PF08241: Methyltransf_11" amino acids 40 to 144 (105 residues), 22.6 bits, see alignment E=2.7e-08 PF08242: Methyltransf_12" amino acids 40 to 141 (102 residues), 34.2 bits, see alignment E=7.3e-12

Best Hits

Swiss-Prot: 69% identical to YMFD_ECOLI: Uncharacterized protein YmfD (ymfD) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 100% identity to eck:EC55989_1370)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (217 amino acids)

>HEPCGN_03690 Tellurite resistance protein TehB (Escherichia coli ECOR38)
LNYKINGINIRSENAAKPHTMPSNYLCKQIESTNKNGNALDFGCGKLRYSEQLVNKFETV
TFLDSRRQLERVQIIRGVQTTIPDYVINNYKNANIVSYENIDKITNHYDFILCANVLSAI
PCESTIHKVLSAIRELLKSDGEALIVNQYKSSYFKRYESGIKHLHGYIYQNSRNAFYYGL
LDVDTVSKICSDNNLEIIKSWSKAGSSYVVVGKHIHI