Protein Info for GFF818 in Xanthobacter sp. DMC5
Annotation: hypothetical protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Predicted SEED Role
"FIG00450823: hypothetical protein"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Compare to protein structures
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (3353 amino acids)
>GFF818 hypothetical protein (Xanthobacter sp. DMC5) MLLSTALTTTLCSLVLVAAPVAVTPAAAQTVVTMPFSYNPPQGTEGAHGANKTHWFEHAN AGNGQEGGSIAATSIIISGGTSNTFVIDSTTLGGDGGKGGNAKVEHGTGHGRGGAGGTGG SGGDFTATISDVTVAQSGDRLLSLRSVGGSGGKGGEGYSDHGSGVGGAGGMGGAGGALSI VISGSNLSSAASGIVITSRGGDGGRGGEGSGGWETSTGGLGGTGGAGGAVSISATSTAVS SASGPAISLISTGGTGGKGGYGHANEAPGDGGNGGTGGAGGAVTVSLTGVTISSANGGAV YAASRGGKGGEGAKGDSALVNATGANGGTGGDAGTVNIQVSGAITSSQTGILAKADGGEG GKGGRADGGASDSFGGTGGTGGNGGNVSLTVGSQSTITTSGSSAPAVAVYANGGAGGFGG DASSVSHAFGGDGGQGGTGGTASLTVQSGVTITTSGDTAHGIIVTANGGAGGNGAPADDS LNETGGNGGTGGSAASGTAVTVNVASGARVQTSGYASNAIVAQSLGGTGANGASVGGFIT SSGGVAGKGGAAGYVYLKSGAAVSTTGNGSVGIVVQSVAGGGGNGGSADAVFVSMGGNGA ISGNGANATGINTGTVTTTGNYAHGMLVQSVGGGGGNLIIGGTCSNGGAGCVAVGGYAGS SGTSGTGGAAETTARNFGSITTGGNFSDGVLAQSIGGGGGNGGGAGGLASLGGQGASGGN GGKTTLYNSGTIVTSGDNSLGLVAQSVGGGGGRGGGTLSVGVGLSAAIGGSGGTGGNGGN VYVTNTSATPSTVTISTSGRYATGLLAQSIGGGGGAGGKAVADTLEGAALTIGGSGGSGG NAGSVTVTNAAGIVTTGDRASAILAQSVGGGGGSGGSGLSQSGGLYVAVASAIGGSGGGG GNGGGVSVTNSAEIITSGLDSMGIVAQSIGGGGGNGGSAAANAISAGVDGSVTVNTSVGG SGANGGTGQNASATNTGSIKTSGAGSTGILAQSIGGGGGTGGDASALGVSVSNGVALTVS ATLGGQGGAGQSSGAVTVSNSGTITTSGDFADGIIAQAVGGGGGNGGVGSTSANAASLSG KTSVTLGLGAGGSGNIAGNAYAVTVVQSGTITTSGVSARGILAQSVGGGGGTAGGGTADA AGGSVDLTVGLGGKGGGGGKGGDVTVNNTGQIVTTGADADAILAQSVGGGGGTGGSASGK SSTKASDLPKGSNSTFTLSADLGGTGGDGGNGGNVTVTSLSPASANPTHIQTSGDHASAI VAQSIGGGGGKGGAAAGSASGGQASLSLTLGAKGGVGGAGGDVTVNTDATIETKGEDSIA ILAQSVGGGGGIGGNSNAASTSKIALGAALAGSGGLGYAGGTVTVTTSGKVTTSGKLSDA ILAQSVGGGGGVGGSVGSDSHASGSQSVSATLTLGGAGGAGSNGGTVSVTNSAIIATTGD MANGILAQSVGGGGGKGGSSTAKGSGGSYSITATLGGAGGTGSQGGQVTVTNSGTILVTG DHSNAILAQSVGGGGGTAGASADASAAKTASLSFSLAGTGGSGGYGGDVSVTSTGDIRTE GQNGVGILAQSIGGGGGNAGSATNAATAKFAIGAAIGGTGGAGGNGGNVTVDLYNAKLGS LVTTGNASDGVLAQSIGGSGGNGGAGSGKADGAGGNSASLDVAVGGGGGSSGKGETVKVN NGSATTQGVAITTLGTGSNGIVAQSIGGGGGKGGATTSSSAAKGSSSTASLTVGIGSNGG SGNTGGGAYVNTVGGTIVTGGDHASGIVAQSIGGGGGIALASHTAADGTKADAAVTATLG GSGGSGNTGGTASVENGATILTLGNFSYGILAQSIGGGGGKSGTSGGAANGGTAGVTLTL AGAGGSGGDGELASVSTSGSVYTAGQGATGILVQSIGGGGGAAGSADNAASGKISIGAAV GGSGGGGGNGGQATATLSVTGGGGRIITTGDAADAVLVQSIGGGGGSAGSGTGKADGKGG NGLGLSVDIGGGSGSGGNGESAIVVNGTGADPSATAFAIVTVGTGSNGLVAQSIGGGGGK GGAASSTTSGTDAANVSATLGGSGATGGNGGAATVVNAGQVQTSGDHASAIVAQSIGGGG GNAVSTVSTASGQSAKLNLGASLGGSGGGGGNGGIATVNNSGTLVTGGDFGHGILAQSIG GGGGSAAVTGNSGTGGTAAVTLSLSGSGGTGGYGNTVSVSDTGNIFTAGTGASAILAQSI GGGGGAAGSAQNATSGKIAVGTIVGGTGGAGGHGGEVSVTATGAVTIVTSGDATDAIVAQ SIGGSGGVGGAGKSTADGKGGNSFDLSATVGGSGGSGGYGGRVEVLFGSGDTSHLVTKGH DSAGILAQSIGGGGGKASVASSSGGDTGGKATVAASLGGSGGSGGNGGNVIIGINGAIQT LGDGSDGVLAQSIGGGGGNASVANSVANGGQNTITATFSLGGAGGVAGNGETVNVTQQGT IVTSGDLANGMVLQSIGGGGGRASTVATDSGNGSFSATVGLGASGGAGGAGGNVYANVFG TIQTSGDASIGVLAQSIGGGGGIAATSSTKTSGSHSVALTLGGDGGSGSAGGIVTVDLAD GSMIHTSGDNAFGVLAQSIGGGGGIGGTSSADATGAVAFGGSAGQGGNGGNIYALAGGTI VTSGTGASAIFAQSVGGGGGIGGSAASAVFSNQDGIQGSGGGSGNGGAVYVSLTGTATTR GDNAPVIVAQSIGGGGGLAATAGGVGLGTAGGAGTGGPVTVLVSGSAIATGDNSPAIFAQ SLGASGNGQIQILVADGGVVRGGTGTAAIVLSGGTQNTVSIAQGATVSGLSGMAIEAGVG DDSVINKGTLNGSVDLGGGTNGLVNEAGATFNSGTVVKTAGDTSTFAATFGAAPGAPGFV NHGTVNPGGLGVIATTSVAGGLGSDGVLQVDVDSASARNDQIRVVGGATLSGTIDPRATS IAPKDSYTIFVADQLTSTAVAKDSGLAYSWAVHADDTSLTISPIAHFLPKGVWLSGNEAS VGGSLQRVWDTGDVGGMSKVFNGLIDINSVLAYQSALGQLSPQLLQAPAGLRIGESQAFL DRTLSCPVFVASSTQLREDNCAWARIIYDHTGQTTTSQMQGYASDSLIFQAGVQRELATD WFLALSGAYQQSSVSSPSGWFSASGNGGDIGVALKRQWGPWQFSAAVDAGWVSYDNTRTI GIAGGQATSNSDVYNVTGRLRASYEFSFSNYYVRPRLDLDLIHVEMPGFSELGRTGAELA LQGSSLTTFVATPALEFGGRMDLPDGVVLRPYMTLGASFASNDAWQTTARFLWAPLSAGS FVTSTPLPDVLGNLDLGLQAVTRDNLEIKVEYGLNVGQDFLSQRGMARFAVHF