Protein Info for PS417_03430 in Pseudomonas simiae WCS417

Annotation: methyltransferase type 11

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 268 PF13489: Methyltransf_23" amino acids 45 to 159 (115 residues), 54.7 bits, see alignment E=2.7e-18 PF13649: Methyltransf_25" amino acids 54 to 140 (87 residues), 43.1 bits, see alignment E=1.4e-14 PF08242: Methyltransf_12" amino acids 55 to 142 (88 residues), 41.6 bits, see alignment E=4.2e-14 PF08241: Methyltransf_11" amino acids 55 to 144 (90 residues), 51.7 bits, see alignment E=2.8e-17

Best Hits

KEGG orthology group: None (inferred from 74% identity to pao:Pat9b_5696)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See U1UQG5 at UniProt or InterPro

Protein Sequence (268 amino acids)

>PS417_03430 methyltransferase type 11 (Pseudomonas simiae WCS417)
MNTTGPAEEPGYTNSYLGDQQAGQLMRLRTLERAFDPLSRTVFGLLPLPERPTILDLGAG
AGSFASWLSTRYSDATVIATDIDPRFLTDIPGIRVITHNAATDDFPAASLDVVHVRALLC
HLPEREDILTRLATWVRPGGWLVIEDVSLQPSLGTANPLFRKVAQAGVTLLEQSIGSDML
WADTLPDRLRERGLSNIGYRTLEGRIGDDSPADAFWATTTAHAGPALLKRGLLSQNDLDA
MVKLRASPTFTEAALTFISAWGQVPERG