Protein Info for PS417_03325 in Pseudomonas simiae WCS417

Annotation: acid phosphatase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 566 TIGR01409: Tat (twin-arginine translocation) pathway signal sequence" amino acids 22 to 42 (21 residues), 17.2 bits, see alignment (E = 4.9e-07) PF04185: Phosphoesterase" amino acids 70 to 534 (465 residues), 293.8 bits, see alignment E=9.8e-92 TIGR03397: acid phosphatase, Burkholderia-type" amino acids 70 to 565 (496 residues), 817.1 bits, see alignment E=6.7e-250

Best Hits

KEGG orthology group: None (inferred from 83% identity to pfs:PFLU0689)

Predicted SEED Role

"Acid phosphatase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1N7TZB9 at UniProt or InterPro

Protein Sequence (566 amino acids)

>PS417_03325 acid phosphatase (Pseudomonas simiae WCS417)
MTNETEDQNSVKKPSDTLPDSSRRRFLGGVAVLGAGATLSACGSPADQPGPVTQRDLTPA
ELDKALHDNVKNVVVIYGENRSFNNLFADFPGVESPLSALKPADYQQRDRDGSLLDTLPQ
VWGGVTQLGPQTIDGVVYPSATQYQEHLPNAPYALKGPNGEDLPLSLVTRDLWHVFYQNQ
MQINGGKNDSFVAWADSGALTFGHYPQTRYSLRLWDVAKEFVLCDNFFQGAFGGSYLNHQ
YLISAQVPFYPDAANSVAKSQIATLQGDDPTGTRLKPLDQSPASAMTGPPQFGPSALTPD
GYAVNTMAPPYWPTWIRDPERPDYAKPDLPSVLVPQSHEHIGDKLSKKNVDWAWYGGAWQ
ATIDEHKDSLAIPKIPSFQYHHQPFNYFKQQGPENRAERNKRLRDGGLGDEPSTNRFMAD
ALAGTLPAVTFYKPQGNLNMHAGYADVASGDRHITRALKMLQESPQWKNMVVIITVDENG
GWWDHVAPPKGDRWGPGTRIPAIVVSPFARKGTVDHTVYDTASILRLITRVFQLEKLDGL
KLRDDAMTARGQKPMGDLSNALQFNL