Protein Info for GFF584 in Sphingobium sp. HT1-2
Annotation: 3-mercaptopyruvate sulfurtransferase (EC 2.8.1.2)
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 42% identical to THTM_RAT: 3-mercaptopyruvate sulfurtransferase (Mpst) from Rattus norvegicus
KEGG orthology group: K01011, thiosulfate/3-mercaptopyruvate sulfurtransferase [EC: 2.8.1.1 2.8.1.2] (inferred from 77% identity to sjp:SJA_C1-06900)MetaCyc: 42% identical to 3-mercaptopyruvate sulfurtransferase (Rattus norvegicus)
3-mercaptopyruvate sulfurtransferase. [EC: 2.8.1.2]
Predicted SEED Role
"Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1)" (EC 2.8.1.1)
MetaCyc Pathways
- thiosulfate disproportionation IV (rhodanese) (1/1 steps found)
- L-cysteine degradation III (1/2 steps found)
- sulfide oxidation IV (mitochondria) (2/5 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.8.1.1 or 2.8.1.2
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Compare to protein structures
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (282 amino acids)
>GFF584 3-mercaptopyruvate sulfurtransferase (EC 2.8.1.2) (Sphingobium sp. HT1-2) MDIIVSTDWLAGEIGKPDLVILDASLFLPGTPRDPRAEFDAAHIPGAAFMDLPSLSDPAD PVPGQLPPDALMTQRTQALGVNADSRIVVYDNSPTHSAARGWWMMRVYGLGASAAILDGG LPKWVAEGRQVDSGTPAMAPGNAVARLDRTQVRSKADILANLASGTAQLLDARGAGRFTG AEAEPRPGMASGHIPGSRNIPSSAFFAADNSLKQGEELRRLLLDAGTDLDRPIITTCGSG VTAAIILAALETLGKRDVSLYDGSWSEWGFDPATPKATGPAA