Protein Info for GFF5730 in Hydrogenophaga sp. GW460-11-11-14-LB1

Annotation: Probable low-affinity inorganic phosphate transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 530 transmembrane" amino acids 16 to 35 (20 residues), see Phobius details amino acids 44 to 65 (22 residues), see Phobius details amino acids 83 to 104 (22 residues), see Phobius details amino acids 125 to 145 (21 residues), see Phobius details amino acids 157 to 175 (19 residues), see Phobius details amino acids 181 to 204 (24 residues), see Phobius details amino acids 218 to 240 (23 residues), see Phobius details amino acids 246 to 269 (24 residues), see Phobius details amino acids 290 to 308 (19 residues), see Phobius details amino acids 337 to 355 (19 residues), see Phobius details amino acids 375 to 393 (19 residues), see Phobius details amino acids 399 to 416 (18 residues), see Phobius details amino acids 500 to 525 (26 residues), see Phobius details PF01384: PHO4" amino acids 65 to 518 (454 residues), 361.7 bits, see alignment E=1.8e-112

Best Hits

KEGG orthology group: K03306, inorganic phosphate transporter, PiT family (inferred from 60% identity to eba:ebA6176)

Predicted SEED Role

"Probable low-affinity inorganic phosphate transporter" in subsystem Phosphate metabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (530 amino acids)

>GFF5730 Probable low-affinity inorganic phosphate transporter (Hydrogenophaga sp. GW460-11-11-14-LB1)
MTKKSRSRFILKHQEVLQLGAAVFFLLLVGLYASLTGASTAGLATSAVWLLIVAAAVGAY
MAMNIGANDVANNMGPAVGSGAMTMGWAIIVAAVFEALGAIVAGGDVVGTIKGGIIDPNA
IADPALFAWVMFSALLAGALWLNLATAVGAPVSTTHSIIGAVMGAGIAAGGWGLVNWETI
VQIVISWVISPLAGGAMAAAFLYIIKRSVTYRSDMIDAASRVVPILIAAMVWAYTTYMLL
KGLGQLVQVGVLTAMAAGVVMAVLVWALVRKPIATLARRQENSKNGVNRLFTWPLVCSAA
LLSFAHGANDVANAIGPLAAIYEAVKDGAIATKAGTPLWIMVLGALGLAVGLALYGARLI
RTVGKEITELDNMRAYAIAMSATLTVIVASQLGMPVSTTHISIGAVFGVGFLRELLKVNY
AKMERVVRSGHQGADRDVVEAYLSRFEAAEVSEKKRMLADMKRLAKQRELAQPEDAVFAK
KEQKAFKKAYKKEIVKRSVVMRIVAAWIVTVPATAVLAALLFYVVRMVLD