Protein Info for PS417_28400 in Pseudomonas simiae WCS417

Annotation: serine/threonine protein phosphatase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 432 signal peptide" amino acids 1 to 29 (29 residues), see Phobius details transmembrane" amino acids 52 to 72 (21 residues), see Phobius details amino acids 84 to 102 (19 residues), see Phobius details amino acids 129 to 147 (19 residues), see Phobius details amino acids 154 to 172 (19 residues), see Phobius details amino acids 178 to 197 (20 residues), see Phobius details amino acids 217 to 236 (20 residues), see Phobius details amino acids 241 to 262 (22 residues), see Phobius details PF00782: DSPc" amino acids 315 to 425 (111 residues), 41.7 bits, see alignment E=5e-15

Best Hits

KEGG orthology group: None (inferred from 90% identity to pfs:PFLU6107)

Predicted SEED Role

"Ser/Thr and Tyr protein phosphatase (dual specificity)"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1N7UBE4 at UniProt or InterPro

Protein Sequence (432 amino acids)

>PS417_28400 serine/threonine protein phosphatase (Pseudomonas simiae WCS417)
MREPGLLKPAVLWLLLLAPLFFSTYGFATWVTSQRSDVGTLVFGWETHMPFWAWTIVPYW
SIDLLYGFSLLLPNTRHELKQHALRLLSAQVIAVSCFLIWPLRFTFERPELDGVFGWLFA
VLAGFDKPFNQAPSLHIALLVILWVMYQRHTQGLWRWLVHGWFALIGISVLTTYQHHFID
LPTGALAGWLCVWLWPVEHPSPLLNARLTRDSKRWRLGLRYGLGALALAVLAFSLGGGWL
WLLWPAVSLGLIKVNYLVLGASGFQKRTDGRLTPAARWLCAPYLAGAWINSRLWTRKHPQ
PDLIVDNVWLGRIPSAKEQDSFNAIVDLCAELPINPQGRAYQSIPVLDLIAPTPTECQQA
AEAIERLRSSGPVLVCCALGYSRSASAVAAWLLHSGRAATVDQALAIIRTARAHVVLHPA
HRQALEGLPHAR