Protein Info for PS417_02625 in Pseudomonas simiae WCS417

Annotation: azurin

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 148 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details PF00127: Copper-bind" amino acids 21 to 148 (128 residues), 99.8 bits, see alignment E=5.1e-33 TIGR02695: azurin" amino acids 23 to 147 (125 residues), 205.6 bits, see alignment E=1.2e-65

Best Hits

Swiss-Prot: 84% identical to AZUR5_PSEPU: Azurin from Pseudomonas putida

KEGG orthology group: None (inferred from 100% identity to pfs:PFLU0545)

Predicted SEED Role

"Azurin"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1N7U415 at UniProt or InterPro

Protein Sequence (148 amino acids)

>PS417_02625 azurin (Pseudomonas simiae WCS417)
MFAKLVAVSLLTLASGQLLAAECKVTVDSTDQMSFNTKAIEIDKSCKTFTVELTHSGNLP
KNVMGHNWVLTSAANMQPVATDGMAAGIDKDYLKPGDDRIIAHTKIIGAGEKDSVTFDVS
KLAAGTDYAFFCSFPGHISMMKGTVTVK