Protein Info for PS417_24685 in Pseudomonas simiae WCS417

Annotation: peptidase S66

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF02016: Peptidase_S66
  • amino acids 14 to 129 (116 residues), 135.6 bits, E=9.7e-44
• PF17676: Peptidase_S66C
  • amino acids 180 to 289 (110 residues), 118.3 bits, E=3.1e-38

Best Hits

KEGG orthology group: K01297, muramoyltetrapeptide carboxypeptidase [EC: 3.4.17.13] (inferred from 92% identity to pfs:PFLU5415)

Predicted SEED Role

"Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13)" (EC 3.4.17.13)

MetaCyc Pathways

• peptidoglycan recycling I (11/14 steps found)
• peptidoglycan recycling II (8/10 steps found)
• muropeptide degradation (1/4 steps found)
• peptidoglycan maturation (meso-diaminopimelate containing) (4/12 steps found)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.4.17.13

Sequence Analysis Tools

See A0A1N7UFJ8 at UniProt or InterPro

Protein Sequence (306 amino acids)

>PS417_24685 peptidase S66 (Pseudomonas simiae WCS417)
MTAAVPALRSEGTIALIAPAGPAILDVEKAGQWMRTRGYDLRIFPGVYERDGYLAGSDKT
RLNDLHNAFANPDIDAIFCLRGGYGTPRLLDSLDFDLLRANPKPFVGYSDITALHLAISR
YAGFVTFHGPMLNADLLGDKQQPTESSLFSMLRGQLGAGSVLAHPAAYPLTTLEPGIACG
RLLGGNLSMIAAVMGTPFEIDAEGIILLIEDVNEPIYRIDRLLTHLRLAGKLAQVAGVLV
GDVAGVDSAALERLLKQTFEPLRIPVLSGWRSGHCDPNLTLPMGALVRLDAGEKRVVLEQ
DVVFKA