Protein Info for GFF4637 in Xanthobacter sp. DMC5

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 743 transmembrane" amino acids 36 to 57 (22 residues), see Phobius details amino acids 65 to 83 (19 residues), see Phobius details amino acids 93 to 113 (21 residues), see Phobius details amino acids 119 to 135 (17 residues), see Phobius details amino acids 144 to 160 (17 residues), see Phobius details amino acids 166 to 185 (20 residues), see Phobius details amino acids 404 to 421 (18 residues), see Phobius details amino acids 427 to 443 (17 residues), see Phobius details amino acids 450 to 468 (19 residues), see Phobius details amino acids 474 to 491 (18 residues), see Phobius details amino acids 498 to 518 (21 residues), see Phobius details amino acids 529 to 548 (20 residues), see Phobius details PF06081: ArAE_1" amino acids 409 to 541 (133 residues), 23.5 bits, see alignment E=1.1e-08 PF04632: FUSC" amino acids 411 to 722 (312 residues), 54.2 bits, see alignment E=2.1e-18 PF13515: FUSC_2" amino acids 418 to 539 (122 residues), 78.4 bits, see alignment E=1e-25 PF11744: ALMT" amino acids 425 to 557 (133 residues), 22.3 bits, see alignment E=1.2e-08

Best Hits

KEGG orthology group: None (inferred from 76% identity to xau:Xaut_0473)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (743 amino acids)

>GFF4637 hypothetical protein (Xanthobacter sp. DMC5)
MEPLAPPRHRPREPFARRVKRWLADHDPGGIDTTRALALGISFVIVIVTGYATSVGFRLG
MDTTFPMMAGCAALVMISFNPGASVAAEGRTMLRLFGVSVAFLALLTAIGPGNGPANDMV
QKLLLIPLSFIALALRRNGMDGQRLGLALIVVATVGTIIRPTRMEAAMLLLAFCQGALVA
AAVRLSPWRPSAVNAFVDTTLDMQGAVASYLRELSAAVRENHPFPPDASEVLEHLRGRVW
NALANAIAEDPAAHSDFEQLRVRFYRLRVAVQLLAGCVPKNTPDTVDWRQPFAAAADHIA
RRLEAVDVSDVHAEERFERAVAQLRHVAFSPDLPGEARFALLRALTAFDRLSMVVTGIAA
AEMAPFPPPHPDAEPDALPPPPKAIPLFVKGPDGRQILSAPYRVACQGAVATAITTAFDL
LIHLDHAYWATMTVMFVIGNSVGETYTRVRYRTVGTLIGVALGFGLFVALEGQIWVMAAF
CMLAQMIAVVTQKDRYDIASAAVGLSVVLGLHIISGLGPEGMIARVYETAIGAAVALAVS
FMVLPVYLTDQVRPEVRALLRRCRSAFASWWPHPGETTSVAALVQDVRGLGLRLPHLGAE
QVFGHSAGDVANIVSTLDVLITYLALMEDVAHRLAATSPSEQLVTVVEAARSRTLTAFEV
VLGQAGPGSADAANPAVAAAVSTVLGLADDAKLRETLPLVADYLAYSEALLRPLRELNAG
LRDKPWRKEDMIAAGAAPATPAP