Protein Info for PS417_23570 in Pseudomonas simiae WCS417

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF08274: YjdM_Zn_Ribbon
  • amino acids 3 to 32 (30 residues), 64.8 bits, E=5.5e-22
• TIGR00686: putative alkylphosphonate utilization operon protein PhnA
  • amino acids 4 to 112 (109 residues), 165.3 bits, E=2.1e-53
• PF03831: YjdM
  • amino acids 47 to 113 (67 residues), 108 bits, E=1.7e-35

Best Hits

Swiss-Prot: 68% identical to YJDM_ECOLI: Protein YjdM (yjdM) from Escherichia coli (strain K12)

KEGG orthology group: K06193, phosphonoacetate hydrolase [EC: 3.11.1.2] (inferred from 91% identity to ppu:PP_0686)

Predicted SEED Role

"Alkylphosphonate utilization operon protein PhnA" in subsystem Alkylphosphonate utilization

MetaCyc Pathways

• phosphonoacetate degradation (1/1 steps found)

KEGG Metabolic Maps

• Aminophosphonate metabolism

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.11.1.2

Sequence Analysis Tools

See A0A1N7UBX9 at UniProt or InterPro

Protein Sequence (113 amino acids)

>PS417_23570 hypothetical protein (Pseudomonas simiae WCS417)
MSTLPPCPKCNSEYTYEDGAQLICPECAHEWSANSEAEAASDETVKKDSVGNVLQDGDTI
TVIKDLKVKGTSLVVKVGTKVKNIRLCDGDHDIDCKIDGIGPMKLKSEFVRKV