Protein Info for GFF4584 in Hydrogenophaga sp. GW460-11-11-14-LB1

Annotation: FIG00581870: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 572 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details PF00135: COesterase" amino acids 34 to 553 (520 residues), 294.3 bits, see alignment E=3.4e-91

Best Hits

KEGG orthology group: K03927, carboxylesterase type B [EC: 3.1.1.1] (inferred from 59% identity to vap:Vapar_2933)

Predicted SEED Role

"FIG00581870: hypothetical protein"

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.1.1.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (572 amino acids)

>GFF4584 FIG00581870: hypothetical protein (Hydrogenophaga sp. GW460-11-11-14-LB1)
MSSNTRWWVAGAACLTLAACGGGGSAETPPGPEVRQIAQGTIKGRNDAAANGTYAWKGIP
FAQPPVGARRWKAPAAVAAWSGTRDTTQFGAACLQNGRLYGPGANNRFDATIGATLNTPV
GSEDCLFLNVWRPASTTTGLPVIVFVHGGSNITGYTADPIYDGAALARSANAVVVTLNYR
LGVLGFMNLPQLKTGLDSAEDSGNFALLDIVQGLKFVKQNAAVFGGNAANVTLMGQSAGA
TNVWSLVASPLGAGLFHKAVPISGGISLATNLPPGTIPSLNPASTSLAQGNALLARLVIA
DGLAVDLPTAQAYIATQSAPQVADYLRGKAGATVLTTLLANNLTGSGPIPDGTVLPLDPI
AAFAAGTYNKVPVLAGTTAEEGKLFPSFLTLLGGPAGFIVTDAQLFNLLFSFDPNAPTLL
TEGDILNAAYVPSNTAVTGWTARAAQLTAASFGAGRDNVLNTLRTQQADIWHYQFDWAQQ
PAPWNTVYGAAHAFDLPFVFGNFGPSLFANAIGGNANRAGRLALSGHMMASVGQFARSGN
PNHAALGATWPAWPGQVRFNASLTAAQITAVP