Protein Info for GFF4563 in Xanthobacter sp. DMC5

Annotation: 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 523 PF01494: FAD_binding_3" amino acids 4 to 333 (330 residues), 237.1 bits, see alignment E=3.6e-74 PF13450: NAD_binding_8" amino acids 9 to 39 (31 residues), 23.9 bits, see alignment (E = 4.2e-09)

Best Hits

KEGG orthology group: None (inferred from 65% identity to xau:Xaut_4320)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (523 amino acids)

>GFF4563 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase (Xanthobacter sp. DMC5)
LVPDVTVLVVGAGPTGLLLGAELKRRGVDSLIIDAHDAPMAWDRATVVHPRSIEVFDHLG
IAAPLLAAGVKQRIARIHADGAVLGEIDLGLAGSRYGYNIGISEEVTEQILTEYLARLGG
GVTRGTKLVDLESHGDGVVAMLENGGETKVIRARWVVGCDGHRSAVRTLAGIGQDGHPIE
EPWAVFDATVTDFPHAFEATYAYLDDNPLILTALPNQRWRAYVRPSGPDSDLVADASVPL
ARYLPASRFVDVANPVRFQCYTRVAQKYRSGRLLLAGDAAHTCSPIQGHGMNSGIQDAFN
LAWKLALVAQGHCADTLLDSYEAERRPVAQRITASGDEADSAQMLKDAADRQARNAIIRE
VLADPQTRHHEAVAEAELDVDYAGSPIVVGEAGPGLAPGQRLPDRIAVGTADGEALMLDD
LVNRTGHTILLLGGERASGEKVASLYQALAERCAAPLYGASFAAAVTGGGPGVASLSGDD
AARLGISGITLLVVRPDGHIGLRADSGHETALTAYGLKLGLRR