Protein Info for GFF4560 in Sphingobium sp. HT1-2

Annotation: ATP synthase gamma chain (EC 3.6.3.14)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• TIGR01146: ATP synthase F1, gamma subunit
  • amino acids 1 to 294 (294 residues), 327.1 bits, E=6.5e-102
• PF00231: ATP-synt
  • amino acids 3 to 294 (292 residues), 324.1 bits, E=5.2e-101

Best Hits

Swiss-Prot: 72% identical to ATPG_SPHAL: ATP synthase gamma chain (atpG) from Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256)

KEGG orthology group: K02115, F-type H+-transporting ATPase subunit gamma [EC: 3.6.3.14] (inferred from 90% identity to sch:Sphch_0067)

Predicted SEED Role

"ATP synthase gamma chain (EC 3.6.3.14)" in subsystem F0F1-type ATP synthase (EC 3.6.3.14)

KEGG Metabolic Maps

• Oxidative phosphorylation
• Photosynthesis

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.14

Use Curated BLAST to search for 3.6.3.14

Protein Sequence (294 amino acids)

>GFF4560 ATP synthase gamma chain (EC 3.6.3.14) (Sphingobium sp. HT1-2)
MASLKELKLRIGSVKSTQKITKAKQMVAAAKLRKAQAAAEAARPYSERLEAVVASLATKI
AGGSGEGASPLLAGTGKDEVHLLVVANSDRGLAGAFNANIVKAALAKARALELDGKKVLF
YLIGRKGRPVINRTYPGKIVANYDTTGAKEPGFAQAQAVAQELSQMFLDGKFDVAHLFYS
RFKSALAQIPTEQQIIPVKIPADADRNAIAATVEYEPSEEAILDDLLPRNVTVQLFKALL
ENNASEQGASMTAMDNATRNAGDLINKLTIQYNRSRQAAITTELVEIISGAEAL