Protein Info for GFF4486 in Xanthobacter sp. DMC5

Annotation: Flagellar L-ring protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF02107: FlgH
  • amino acids 63 to 244 (182 residues), 171.7 bits, E=5.8e-55

Best Hits

Swiss-Prot: 67% identical to FLGH_AZOC5: Flagellar L-ring protein (flgH) from Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571)

KEGG orthology group: K02393, flagellar L-ring protein precursor FlgH (inferred from 67% identity to azc:AZC_0630)

Predicted SEED Role

"Flagellar L-ring protein FlgH" in subsystem Flagellar motility or Flagellum

Protein Sequence (245 amino acids)

>GFF4486 Flagellar L-ring protein (Xanthobacter sp. DMC5)
MRTMLPLRAALAAITCLAVAGCKTSYDNLATGPTLTPVGYGLDTAKREPLPMTFQQPPKT
TFRSTWDLNRSSSMYRDLRAAKVGDVIRVAIAIDDKAQFDNATDRSRESKSNLGFDAALT
LSGFGKGTTAGAGSGNLDINGDTKTKGKGNIDRSEKLRLSVAVVVTEILPDGNFVIRGSQ
EILVNYEVRELTIAGIVNPLDVSSTNIIPYDKIAEARISYGGRGRLTDVQQPAWGQRIYD
VVTPW