Protein Info for PS417_19265 in Pseudomonas simiae WCS417

Annotation: membrane protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 695 transmembrane" amino acids 25 to 49 (25 residues), see Phobius details amino acids 76 to 95 (20 residues), see Phobius details amino acids 100 to 121 (22 residues), see Phobius details amino acids 151 to 175 (25 residues), see Phobius details amino acids 196 to 218 (23 residues), see Phobius details PF00884: Sulfatase" amino acids 313 to 591 (279 residues), 199.4 bits, see alignment E=4.3e-63

Best Hits

KEGG orthology group: None (inferred from 97% identity to pfs:PFLU4327)

Predicted SEED Role

"Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1N7U9M1 at UniProt or InterPro

Protein Sequence (695 amino acids)

>PS417_19265 membrane protein (Pseudomonas simiae WCS417)
MANPDALNQQRASNRLLQPTVKSHLAYTLLCALVMMVMFSLLRLALLVYNREMILDTPAS
TFLEAFGNGTRLDIRFVMYALIPLLLALFSVRAMAARGFFRLWLTVVSSIALFLGLMEMD
FYREFHQRLNGLVFQYVKEDPSTVMSMLWYGFPVVRYLLAWAVGTLILSMAFTGADRATR
PRGPFSGGSIGTRQVAPWYTRIAVFVVCLLIAVVAIRGTLRQGPPLRWGDVYTTDSNFAN
QLGLNGTLSLIGAAKARFSEHRDNTWKATLEQPLATQTVRDMLVLPTEKLVDTDTAAVRR
EFTPPAEKTLPIKNVVVILMESFAGHSVGALGRPGNITPYFDKLSKEGLLFDRFFSNGTH
THQGMFATMACFPNLPAFEYLMQTPEGSHKLSGLPQLLSARKFDDVYVYNGDFAWDNQSG
FFSNQGMTNFIGRNDFVDPVFSDPTWGVSDQDMFNRGLEELKAREGGKPFYALLQTLSNH
TPYALPTPLPVEKVTGRGSLDEHLTAMRYSDWALGQFFEKARKEPYFKETLFVIVGDHGF
GNEQQITEMDLGRFNVPMLMIAPGIQEKFGERDHTVGTQIDIVPTIMGRLGGETLHQCWG
RDLLNLPEGDKGFGVIKPSGSDQTVALLTGDRVLVLPKEMPPKLWSYELGAEPSGKVISE
SPDEAALKQKLESFLQTATKSLLDNTAGVVDGKPD