Protein Info for PS417_18740 in Pseudomonas simiae WCS417

Annotation: acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 165 PF00583: Acetyltransf_1" amino acids 42 to 145 (104 residues), 59.6 bits, see alignment E=5.5e-20 PF13673: Acetyltransf_10" amino acids 48 to 150 (103 residues), 30.1 bits, see alignment E=6.6e-11 PF13508: Acetyltransf_7" amino acids 53 to 147 (95 residues), 42.5 bits, see alignment E=1.1e-14

Best Hits

KEGG orthology group: None (inferred from 85% identity to pfs:PFLU4222)

Predicted SEED Role

"Histone acetyltransferase HPA2 and related acetyltransferases"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1N7UI50 at UniProt or InterPro

Protein Sequence (165 amino acids)

>PS417_18740 acetyltransferase (Pseudomonas simiae WCS417)
MSPRPSIQAVTAADIPEVMRFVLRARAELFPTLSATGVPADLAHFEATYLQGDGHFLVAR
DEGQIVAGIGYLPYDGRFPQLNYQGRKTVEVVRLFVLPAFRRCGLAGELYRALEVQAKED
RVAVMYLHTHPFLPGAIDFWLRQGFEVVDVDADPVWRTTHMQRAL