Protein Info for PS417_18010 in Pseudomonas simiae WCS417

Annotation: acid phosphatase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 274 signal peptide" amino acids 1 to 18 (18 residues), see Phobius details PF03767: Acid_phosphat_B" amino acids 73 to 246 (174 residues), 133.3 bits, see alignment E=9.9e-43 PF13344: Hydrolase_6" amino acids 117 to 179 (63 residues), 32.4 bits, see alignment E=8.2e-12

Best Hits

KEGG orthology group: K01078, acid phosphatase [EC: 3.1.3.2] (inferred from 92% identity to pfs:PFLU4030)

Predicted SEED Role

"Acid phosphatase (EC 3.1.3.2)" (EC 3.1.3.2)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.1.3.2

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1N7UC19 at UniProt or InterPro

Protein Sequence (274 amino acids)

>PS417_18010 acid phosphatase (Pseudomonas simiae WCS417)
MRNLIFVSLCLLAGCQQTPPANDQLDAVLWTQTSIEHELIYRQLFANATRQLDVALADPT
WDALPLPPRNLTGLPPAVVVDIDETLLDNVPLNARDVVNNQVYSYDRWNTWVDQAKAQAL
PGAVAFLQAAQQKGIAVYYLTNREHSQVTATVKNLRLRGFPVESDEHVLAASTPTGHCES
AGYGKNCRRQWVAAHARVLLMAGDSLGDFVQAEHNTVADQRKAVAPYVNWLGQRWFLLPN
PTYGSWYSAPYGDDEKLPFEQKRTLKQQALQLQE