Protein Info for PS417_14955 in Pseudomonas simiae WCS417
Annotation: hypothetical protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
No protein families (PFam or TIGRFam), signal peptides, or transmembrane helices were found in this protein.
Best Hits
Predicted SEED Role
No annotation
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Compare to protein structures
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A1N7TZY6 at UniProt or InterPro
Protein Sequence (1352 amino acids)
>PS417_14955 hypothetical protein (Pseudomonas simiae WCS417) MVSSTQSATVSAATYQSPPPDAQQPPSPQSAPQAPDWLELIKSTPRYIADAELAGTYAAA LTRAAQDLPLPVTGSEAVYPVPVDSTFGQWRNHLDSLVAGDDFKQWAHANRVDLSRPLRI FPPSDTTPGWIQAYAKPSASGEAGARASILALGAQFSDGQSLPASWPLIMQTSKTLAAGN ISVSVPSPGRSDPVTHAKRPADLKDIATFYGEQVPHSREALTERANDVKHANTFPLPGAV LSPAQFELRSETALEQQQREWGDVRNNNRLCQLLSTAITPPSASANATDSPPSFIDSPHT SEQAAQHEKTLIAQMLDSDAFKLNVDPTSWYVQDEQLAPEASVSLRRFITDKGWIVPQTK DDINNLIKSIQRGPLPSIPHGNLTGALSWAAALTLDEKKQLYSHIRFNNLKLPDLGASHA VNNEGGAFTYLTKNRHWTDAELNAPREIVEDILRSPKARTLEAALQRKMGVAGDTDGSDM TLAAILLGLDAPTAHDVSKRNECAGFDLAAPRFYGQPLSHIKQALIPHLAESGRCTARMA PVAAFMLLSSAAPELLVKDIPADVTYGSPAWATLKATVAYIEAKSPGSSSLMSFAEVVKY AAIDPVATEDQALLNAAKLDMVIDWALVHGVLSPSPTGRYSDEQLDTAQKTFSEVMSELQ TTPGDITAKVPLLKDQALEELGKRYKNVPFELAVLTTPQARANNALNNDILHTNTGPYSL LDLYLSGRAPAPQEDNTWYSLREQALPGTTTGLLHHLPDIKSVHRLAVANYQQRRESGLV TLSKHLIAQQPISDRKQLEYGKLEIFIEGTVIKHRVVTKSGAVNLDQSTPSQDPSKRALI IKSTHENKVKFYEFCPQHNYLKARDDLGSAFVPGPQGLWIKAPTPHLAGEKFSNTAITPF SVSQTDSHKLQAITPPADASVPASYNSARSQFLGELLSKHTLGDVELEQLVNASGHTTRF DEEDEEFERNRELLFASMVVVNPIRNVLNGDWLAVASDIVFDGVMYLTTAGLGKVAGAAA KPVNSALKQSGKPFGRRLFTQTPAQPSGGLNANFHKFSPGKTGQYDFSDLARKPDIAQGT YKRSLTEFSTPARFDRTTRKWYAVDPKTNKTYGKPLEDFKPQVSAAPGTSTPAMTPQQRA LDIGLSRDNVIQMGGPMRDLKLIGNEVHTFTDTYKGTNRLNVVAHGIKRNWVERITGDGT KIIMDNTLYDAPGLAKLLRAKGVDLTSADNVRLLVCYSAEGRSKAFGRLFQQEINKPVKA FEGTVSLTHGSTSVTAIRNGVRNEVLRNYPNGTSAVIEQATDLLTEGLFNGKAIPHIQKN HGQTIRINIAPPGLPPIHDDLRITYRPRQFTR