Protein Info for GFF2824 in Sphingobium sp. HT1-2

Annotation: alpha-L-fucosidase (EC 3.2.1.51)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF01120: Alpha_L_fucos
  • amino acids 30 to 428 (399 residues), 258.5 bits, E=6.2e-81

Best Hits

KEGG orthology group: K01206, alpha-L-fucosidase [EC: 3.2.1.51] (inferred from 58% identity to cak:Caul_1302)

Predicted SEED Role

"Alpha-L-fucosidase (EC 3.2.1.51)" in subsystem L-fucose utilization or L-fucose utilization temp (EC 3.2.1.51)

MetaCyc Pathways

• xyloglucan degradation II (exoglucanase) (5/8 steps found)

KEGG Metabolic Maps

• Other glycan degradation

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.2.1.51

Protein Sequence (541 amino acids)

>GFF2824 alpha-L-fucosidase (EC 3.2.1.51) (Sphingobium sp. HT1-2)
MQDFGRRSFLAGAAALGLANAARAASPMGTAKGPVQASWPSLVDNYRYPDWFRDAKLGMW
SHWGPQSVPAQGDWYGRFMYMQGHPMYEHHLKTYGHPSVAGMKDIQNLWTADKWDPDALM
AKYQKAGAKYFMALACHHDNLDCYDSRYHAWNSLRVGPKKDIVGIWEKAARKAGLKIGVS
NHAAHAWHWYQPAYGYDPVGPQKGVRYDAFRLRKEDGKGQWWDGLDPRELYTGGHAVLPD
GIDTIEAMDKWHDANNGQWIETGPKDDPAYVTRWLLRQTDLVAKYKPDMVYMDDHELPFG
PVGLEAAADYYNRSIEWHGKIDVVMTGKQLKPYARFGIVQDVERGYTDHIWDEPWQTDTC
IGDWFYNIARLTDKSYKSAEQVIQRLADVVSKNGNLMLSIPQPGDGSIDSEAEKILDAMA
GWMVHGGEAIFGSRPWKRYGEGPTQAIVGMQNEEKAKPFTAQDIRFTTNKGALYALFLGK
PAGSTTIRSLARGQGTGTIERVTLLGGGQLAFRQDGAGLHFTMPHGIDFVPAVRIDGRGL
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