Protein Info for PS417_13995 in Pseudomonas simiae WCS417

Annotation: NADP-dependent oxidoreductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 336 PF00248: Aldo_ket_red" amino acids 16 to 311 (296 residues), 231.5 bits, see alignment E=6e-73

Best Hits

KEGG orthology group: None (inferred from 96% identity to xtr:100490234)

Predicted SEED Role

"Oxidoreductase, aldo/keto reductase family"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1N7UFM8 at UniProt or InterPro

Protein Sequence (336 amino acids)

>PS417_13995 NADP-dependent oxidoreductase (Pseudomonas simiae WCS417)
MIYRTLGQSGLKVSALTLGTMMFGEQTNTEDSLRIIDKAWDQGINFIDTADVYTGGRSEE
IVGEAIVRNRQDWVVASKVGIGPVDGLPNRSGLSRKRIFNALEASLTRLDTDYLDIYYLH
REDHNTPLEVTVSAIGDLIRQGKIRYWGLSNYRGWRIAEVIRVAERLGVDKPVISQPLYN
IVNRQAEVEQITAAAAYGLGVVPYSPLARGVLSGKYAPDVTPEAGSRAARQDKRILETEW
RVESLRIAQQIQQYTQGRGVGIVEFAIAWVLNNSAVSSAIVGPRTEAQWDAYIGALEVKI
SAEDEAFIDSLVTPGHSSTPGFNDVGHFVSGRLPRA