Protein Info for PS417_13360 in Pseudomonas simiae WCS417

Annotation: GCN5 family acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 160 PF13673: Acetyltransf_10" amino acids 29 to 132 (104 residues), 40.9 bits, see alignment E=2.9e-14 PF00583: Acetyltransf_1" amino acids 30 to 129 (100 residues), 47.5 bits, see alignment E=3.2e-16 PF13508: Acetyltransf_7" amino acids 55 to 130 (76 residues), 41.4 bits, see alignment E=2.4e-14

Best Hits

KEGG orthology group: None (inferred from 68% identity to psb:Psyr_3814)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1N7U6K3 at UniProt or InterPro

Protein Sequence (160 amino acids)

>PS417_13360 GCN5 family acetyltransferase (Pseudomonas simiae WCS417)
MLLIRPAKRTDAEAAFDIRLQAIRHQCITVYTAEQVMAWTDVPLTDRYRAWVEKEYHVAW
LGEIPVATGLIDFQSGEIGAIFVLPAFMGQGIGKTMLLYLERLAFKAGIVDIHLDATPNA
TAFYRRCGYHGDIQAIYTSPSGLELACTPMRKQLASGELL