Protein Info for GFF2575 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Annotation: L-asparagine permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 497 transmembrane" amino acids 37 to 56 (20 residues), see Phobius details amino acids 62 to 85 (24 residues), see Phobius details amino acids 107 to 133 (27 residues), see Phobius details amino acids 145 to 165 (21 residues), see Phobius details amino acids 173 to 194 (22 residues), see Phobius details amino acids 218 to 239 (22 residues), see Phobius details amino acids 260 to 281 (22 residues), see Phobius details amino acids 302 to 325 (24 residues), see Phobius details amino acids 351 to 373 (23 residues), see Phobius details amino acids 380 to 400 (21 residues), see Phobius details amino acids 421 to 442 (22 residues), see Phobius details amino acids 448 to 468 (21 residues), see Phobius details PF13520: AA_permease_2" amino acids 35 to 457 (423 residues), 131.4 bits, see alignment E=4.4e-42 PF00324: AA_permease" amino acids 35 to 476 (442 residues), 472.5 bits, see alignment E=1.5e-145

Best Hits

Swiss-Prot: 100% identical to ANSP_SALTY: L-asparagine permease (ansP) from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

KEGG orthology group: K11738, L-asparagine permease (inferred from 100% identity to seg:SG1543)

Predicted SEED Role

"L-asparagine permease"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (497 amino acids)

>GFF2575 L-asparagine permease (Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868)
MKTQTTHAAEQHAAKRRWLNAHEEGYHKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAG
PALALVYLICGIFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGWMYFINWAM
TGIVDITAVALYMHYWGAFGDVPQWVFALGALTIVGTMNMIGVKWFAEMEFWFALIKVLA
IVIFLVVGTIFLGTGQPLEGNATGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIELVG
TAAGECKDPQKMVPKAINSVIWRIGLFYVGSVVLLVLLLPWNAYQAGQSPFVTFFSKLGV
PYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMSMGGSAPKFMAKMSRQHVPYAGILATL
VVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIMVCQMRLRQAIKEGKAADVSFKLP
GAPFTSWLTLLFLLSVLVLMAFDYPNGTYTIASLPLIAILLVAGWFGVRRRVAEIHRTAP
VTADSTESVVLKEEAAT