Protein Info for PS417_00130 in Pseudomonas simiae WCS417

Annotation: SulP family inorganic anion transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 530 signal peptide" amino acids 1 to 23 (23 residues), see Phobius details transmembrane" amino acids 32 to 51 (20 residues), see Phobius details amino acids 56 to 91 (36 residues), see Phobius details amino acids 103 to 121 (19 residues), see Phobius details amino acids 129 to 153 (25 residues), see Phobius details amino acids 185 to 204 (20 residues), see Phobius details amino acids 211 to 234 (24 residues), see Phobius details amino acids 253 to 276 (24 residues), see Phobius details amino acids 297 to 316 (20 residues), see Phobius details amino acids 336 to 366 (31 residues), see Phobius details amino acids 386 to 416 (31 residues), see Phobius details amino acids 437 to 450 (14 residues), see Phobius details PF00916: Sulfate_transp" amino acids 27 to 391 (365 residues), 283.5 bits, see alignment E=3.5e-88 PF01740: STAS" amino acids 435 to 516 (82 residues), 37.6 bits, see alignment E=2.5e-13 PF13466: STAS_2" amino acids 451 to 509 (59 residues), 33.5 bits, see alignment 5.8e-12

Best Hits

KEGG orthology group: None (inferred from 96% identity to pfs:PFLU0025)

Predicted SEED Role

"Sulfate permease" in subsystem Cysteine Biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1N7TY50 at UniProt or InterPro

Protein Sequence (530 amino acids)

>PS417_00130 SulP family inorganic anion transporter (Pseudomonas simiae WCS417)
MPWPNRHTLFPFLAWLPRQTRASVGRDAMVGLSGAVLALPQSIAYALIAGLPPEYGLYAA
IIPVLIACLWGSSWHLICGPTAAISIVLYASVSPLAVPGSQDYITLILLLTFLAGVFQWL
LGMLRFGALVNFVSHSVVLGFTLGAAVVIALGQLPNLLGLDLPSQATAINNLLTLIHHSG
EWDPASVILGLGTLLVGALLKYLVPRWPTLLIALTLGSLVTWLWPAMFGHVALVSSFIGK
LPPLSPLPMDLDVILRLLPSAVAVGMLGLVTSLSIARSLSVRSQQLLDANQEIRAQGFSN
IVGGFFSGYLSAGSFTRSGLSYEAGACSPLAGVFSALWVALFALFGAALIAHIPIPSMAA
SILLISWGLVDRRGIRALFRVSRAEFVVMSLTCVATLLLELQTAIYAGVLASLFFYLKRT
SQPRVQQWRDGDEDVLRVGGSIFFGASHYLQVRLQSLQGKRVVIEAQQINFIDYSGVEML
HQEARRLRGLGRSLTLRRARPQVVEELRKLEGADNCPIHFQASIAKTEHP