Protein Info for PS417_12535 in Pseudomonas simiae WCS417
Annotation: nitrilase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: K01501, nitrilase [EC: 3.5.5.1] (inferred from 94% identity to pfs:PFLU2708)Predicted SEED Role
"Plant-induced nitrilase (EC 3.5.5.1), hydrolyses beta-cyano-L-alanine" (EC 3.5.5.1)
MetaCyc Pathways
- indole-3-acetate biosynthesis V (bacteria and fungi) (1/1 steps found)
- indole glucosinolate activation (herbivore attack) (8/13 steps found)
- indole-3-acetate biosynthesis II (5/12 steps found)
KEGG Metabolic Maps
- Benzoate degradation via CoA ligation
- Cyanoamino acid metabolism
- Nitrogen metabolism
- Styrene degradation
- Tryptophan metabolism
Isozymes
No predicted isozymesUse Curated BLAST to search for 3.5.5.1
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Compare to protein structures
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A1N7U391 at UniProt or InterPro
Protein Sequence (308 amino acids)
>PS417_12535 nitrilase (Pseudomonas simiae WCS417) MPVSTVAALQIGSLPGGKGETLAQILSYEDEILRSGAQLVVMPEALLGGYPKGEAFGTQL GYRLPEGREAFARYFDNAIDVPGPETQALAGLSARTGASLVLGVIERSGSTLYCTVLYFE PAGGLVAKHRKLMPTGTERLIWGKGDGSTLPVIDTAVGRVGGAVCWENMMPLLRTAMYAK GVEVWCAPTVDEREMWQVSMRHVAHEGRCFVVSACQVQASPEALGVQVANWPAERALIAG GSVIVGPMGDILAGPLLGEAGLLTAQINTDDLVRARYDYDVVGHYARPDVFELVVDERAK PGVRYITD