Protein Info for GFF2411 in Hydrogenophaga sp. GW460-11-11-14-LB1

Annotation: Phosphoglycerol transferase I (EC 2.7.8.20)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 586 signal peptide" amino acids 14 to 20 (7 residues), see Phobius details amino acids 35 to 39 (5 residues), see Phobius details transmembrane" amino acids 21 to 34 (14 residues), see Phobius details amino acids 68 to 87 (20 residues), see Phobius details amino acids 96 to 113 (18 residues), see Phobius details amino acids 151 to 169 (19 residues), see Phobius details amino acids 181 to 200 (20 residues), see Phobius details amino acids 211 to 229 (19 residues), see Phobius details amino acids 248 to 267 (20 residues), see Phobius details amino acids 294 to 314 (21 residues), see Phobius details amino acids 327 to 350 (24 residues), see Phobius details amino acids 381 to 399 (19 residues), see Phobius details amino acids 411 to 433 (23 residues), see Phobius details PF01569: PAP2" amino acids 98 to 231 (134 residues), 33.2 bits, see alignment E=2.1e-12

Best Hits

Predicted SEED Role

"Phosphoglycerol transferase I (EC 2.7.8.20)" (EC 2.7.8.20)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.8.20

Use Curated BLAST to search for 2.7.8.20

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (586 amino acids)

>GFF2411 Phosphoglycerol transferase I (EC 2.7.8.20) (Hydrogenophaga sp. GW460-11-11-14-LB1)
MHALSCPRWAPLHLLRSNPALWLLGLLALTLLWDTTHLDMTVMQFIGTPQGFAWKDDWLL
SRVLHDGMRQAMTFAWLLLCAWAVWPGLRMPRRERWAVVALATLSLLAVNLVKNASLTSC
PWDLQAFGGAARRVSHWAWGVVDGGPGRCFPGGHASCGFAFIALCLPWLDAPQGTQRRRA
IGLRWLAAVLSIGLLAGAVQTLRGAHFPSHTLWTLLICAAVSVTGWRLMQPRLSAPSRRQ
SVSASLAALRPLLTPMASMLAVLWISRLGLAAWQAERISQAQAWSHVWLQGLRFDAVLMG
MVWAFPAALAPWMATARATQRVWPTVLRWYGGLVLLLTAFMELATPAFIAQYDSRPNYLF
IEYLGYVKEVGGTLVKDRGPHLLAAAVLLPALVWVYARLSHPTRPSASLRVWQAAPLSVL
LFALLALCARGALGHRPANPASVAVTTDHLVNELPLSSLYTVSYALYQSRKAEEGGITYA
EMTEARVIDVVRRETGLPANAFNHPNSPLRHRQTSLHPRARPLNLVIVLEESLGAEFVGR
LGGLPLTPNLDRLGDQGIWFDKLYATGTRSVRGIEAVVAGFPPTSG