Protein Info for GFF2361 in Xanthobacter sp. DMC5

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 415 transmembrane" amino acids 20 to 42 (23 residues), see Phobius details amino acids 57 to 79 (23 residues), see Phobius details amino acids 86 to 106 (21 residues), see Phobius details amino acids 112 to 136 (25 residues), see Phobius details amino acids 147 to 165 (19 residues), see Phobius details amino acids 178 to 197 (20 residues), see Phobius details amino acids 230 to 253 (24 residues), see Phobius details amino acids 265 to 286 (22 residues), see Phobius details amino acids 294 to 315 (22 residues), see Phobius details amino acids 321 to 346 (26 residues), see Phobius details amino acids 353 to 373 (21 residues), see Phobius details amino acids 385 to 404 (20 residues), see Phobius details PF07690: MFS_1" amino acids 29 to 369 (341 residues), 127.6 bits, see alignment E=5.6e-41

Best Hits

KEGG orthology group: None (inferred from 82% identity to xau:Xaut_1369)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (415 amino acids)

>GFF2361 hypothetical protein (Xanthobacter sp. DMC5)
MSAPSSPSAASGRSRAVPAILILIAGSAVALLTFGPRSVFGLFLLPMSQEFGWGRDVFGF
AVAIQNLLWGVGSPFAGALADRFGTVRVLCCGALIYAAGLALMAYATTPGLLHLSAGVLI
GFGLSAASFNLVLAAFGKLLPNEWKSIGFGLATAAGSFGQFLFPPLTRGLMDTIGWHETL
LVFGASLLIVLPFSLALSTRAATPSAASAAQAPQQSIGAALSEALRHPSYVLLVLGFFTC
GFQLAFVTVHMPAFLVDKGMSLSVGAYTLALIGLFNILGSLTAGYLSNRMSRKVLLSVIY
AGRGIAIAVFVMSPITATSCYVFGAAMGFLWLSTVPPTSGLVMLMFGTRYMAMLYGFAFF
SHQVGGFLGVYLGGEIYEATKSYDWLWWLSVALSFASAAINLPIRERPVHRPVTV