Protein Info for GFF2277 in Xanthobacter sp. DMC5

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 148 PF00583: Acetyltransf_1" amino acids 33 to 132 (100 residues), 59.2 bits, see alignment E=7.4e-20 PF13673: Acetyltransf_10" amino acids 56 to 134 (79 residues), 25.3 bits, see alignment E=1.9e-09 PF13508: Acetyltransf_7" amino acids 56 to 134 (79 residues), 41 bits, see alignment E=3e-14

Best Hits

Swiss-Prot: 31% identical to HPA3_YEAST: D-amino-acid N-acetyltransferase HPA3 (HPA3) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

KEGG orthology group: None (inferred from 77% identity to xau:Xaut_0311)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (148 amino acids)

>GFF2277 hypothetical protein (Xanthobacter sp. DMC5)
MGEALLIADAEPQDEAAWRRLWAGYNAFYETEVGADITARTWARILDPSVPMIGRIARRG
GEPVGFSISILHEGTWVTAPVCYLEDLFVDPACRGGGIGRALIADLVRLGKERGWSRLYW
HTRQDNPARRLYDSFVTADDFVRYRMDL