Protein Info for GFF2255 in Xanthobacter sp. DMC5

Annotation: Cell division protein FtsZ

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 594 TIGR00065: cell division protein FtsZ" amino acids 14 to 329 (316 residues), 396.8 bits, see alignment E=1e-122 PF00091: Tubulin" amino acids 16 to 176 (161 residues), 167.9 bits, see alignment E=3.2e-53 PF12327: FtsZ_C" amino acids 225 to 320 (96 residues), 124.3 bits, see alignment E=2e-40 TIGR03483: cell division protein FtsZ, alphaProteobacterial C-terminal extension" amino acids 456 to 594 (139 residues), 64.5 bits, see alignment E=1.4e-21

Best Hits

KEGG orthology group: K03531, cell division protein FtsZ (inferred from 90% identity to xau:Xaut_0328)

Predicted SEED Role

"Cell division protein FtsZ (EC 3.4.24.-)" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton (EC 3.4.24.-)

Isozymes

Compare fitness of predicted isozymes for: 3.4.24.-

Use Curated BLAST to search for 3.4.24.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (594 amino acids)

>GFF2255 Cell division protein FtsZ (Xanthobacter sp. DMC5)
MTINLQMPDIRELRPRITVFGVGGAGGNAVNNMITSGLHGVEFVVANTDAQALALTKAER
VVQMGVAVTEGLGAGSQPEVGRAAAEEVIDEIRDHLSGSHMVFITAGMGGGTGTGAAPVV
ARAARELGILTVGVVTKPFHFEGQRRMRVAEHGISELQKSVDTLIVIPNQNLFRVANEKT
TFADAFAMADQVLYSGVACITDLMVKEGLINLDFADVRAVMRDMGKAMMGTGEASGDKRA
IQAAEAAIANPLLDETSMRGAGGLLISITGGKDMTLFEVDEAATRIREEVDPDANIILGA
TFDEMLDGIIRVSVVATGIDPAVIPEQLQPVADRFPELAGRKISNAGRAAVEATREAQIR
SAVAAIQAEDLIAMEDAAQKGQAPQAYAPQSYAPPAQPQQAPADRAVAIDDVTIRTAPPK
PTYFAEPEPAPQPAPMVEDEFAPYIPPAGQRPRSPRMPRVDELPLPAQNQIRAQRGEPPV
EQAQPDKKRMTLLQRLAHVGRREEPEPEPARREQPSMRAPERRPEQQRPDPRGEGRGEPR
DARPTMPSRGGEPPVSEFAKRPPMRPAAEVPSRPGPHHDDDQLEIPAFLRRQAN