Protein Info for PS417_11315 in Pseudomonas simiae WCS417
Annotation: hemagglutinin
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Predicted SEED Role
"Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A1N7UGN1 at UniProt or InterPro
Protein Sequence (4190 amino acids)
>PS417_11315 hemagglutinin (Pseudomonas simiae WCS417) MVRCKTPVNLKAPVTVLRLKPLAQAIALLMVAGNAQAATAFSSGWFADKGASQASTAART GAGQVPGIPSLNQQAQAKQQLARSISTLNTSVAAIAAQQAAQAAGRQAAFGQVSNIPDGL GKGGLQVDNSLTQGWTNAKGPIQSQSGGKTTVTIEQTADKAILNWETFNVGRNTTVDFQQ QSTWAVLNRVNDPNARPSEIQGQINGAGTVMIMNRNGVVFSGTSQVNVRNLVAAAATMTD DQFTQRGLYVDTNGTQPTFTDAAGKVEVQRGALIQTHTAATSTDSGGYALLLGSEVENAG TIITAKGQATLAAGDSFYIRKGVGTAGNDRSTTRGNEVATSLKAGSTAGNVTNSGLIMAS TGDITLTGHQVQQNGVALASTSVDTRGTIHLLNAASDTRGSVTLGEGSTTAVLLDASGST ALNSQKDNGLIKLDGTPANLITGQFNNLSAVVDRTDQSRIEIVSGGTVDFQKGSITLATG GQVAVSAGQRSLVRDGAMIDVSGAIGVKVAMESNAIKINVQGNEQRDAPVNRDGGQLINN DVWVDLRELVFVPAGTNGYATDRWYTAGGLLEVGGYLGTQGHSVGEWMAQGGTVTFTGKE AVTQKGAQINLSGGTVDVQAGYIQQTWLKGPDGRLYEVSKAPGDILYSGFYKGYEDTSVR WGQTESYYNPLIAPQRRYEAGYTVGRDAGKLVIGTSSAVLEGQVISDVFQGDRQTQAPTI NLDGYQQSQKARAQRAQLIIGQYIPVYNKTTGTLRYALSGTSDQVLIDSNTQKIADGLDL GTVLPSDRQGKILLDSDQLNGARLGAVKVAAKQQVNVNGALSVADGGDITLFGPGVQINA NLTAHGGSVNAGNILSQVDPLKAGEVTDTILAGGSNVNVAAGVKLDTSGRWNNLALDPAA SAGVAYVNGGKVSLRSASNVNLAAGSVVDVSSGGTLGVDGKLTGGKGGNGTLGALGALAL EGDVRGYGVNGGGTLALQAHKVQIGESTNAVGSDTLKLAGDFFNKGFSAYDITGNEGLIV TDGTQVDVSLPVFRLGAQASGMPTGSDPATALERWTPPLYQEDAAKGVLTQRRGAGVSLT AGHVNSTAAQLATTALTVGQGAVIHVDPGQAINLRSVGQLTMDGTLNAWGGNVSLGGLTT GASEAVNAIGHGRSIWVGEQAVIDVSARAATAVDNRGRTYGLVRDGGSLNIGGTFDLNTG LAKASDLFVVVRNGARLEASGTQALINVPGQGAVQAASNGGSITLASNNGLYLEGRFVAR AGGAGAAGGSLNVALDTPYYQKASVTDRVLKVRELVLGQAHQPTALAGTAEDAAASLAYG QGRLGVDQVSAGGFDNLALLSNGLLSFDGDVTLNMGQSLRLYSRGYGLSDNAAGNSRINL SAPYLLLAGFLAPEETGKDLYVRPVPVLPAPSQQATEAQLTATGSLIDVRGNVIFGNRSH VFRADNSQASLERRGFDQVNLTSQGDLRFLAGAAENDIITGVSTQLLTQGDMTLRAAQLY PATEVSARVIAGYRGQSTTTSLDLDFDPLRTLTIGRVGSADAPIPYSAFGRLQLGAATVR QGGVVRAPLGLIDIGSMGSSVVQLLPGSLTSVSGKGLVLPYGGTLDGQVYKYNGKTVKFI GQGGVVTREGDLNVGVILGGKTISVLPDATLDLSGGGDLLGAGFVSGRGGSTDARYNPLV QFGANGGFVLPGLSTNPIYAIVPGIQPGAAPVAAEGGAVTPLVGQQITIGAGVPGLPAGT YTLMPSTYALMPGAFRVEINGLAGQGSGTATTLMRNGSWATSGHLSIAHTGISNSVASQL TLTSADTLRRYSDYNETRYAQFARADAARLGVPRPMLEADAKTLKLALRPGDGAEAFSFQ GIGRFGAASGGYGGTVAVIDRSTQGIEVVGAGQSATAGFAGITFNADSLNALGASRLVVG GMTVVEYGQSGNFIYLANGVNRADSNVILRNGATLAAPEVFLVSNTGSIIVEQGASINTL GRGNASYDARDGYIYQVANTLAVSNGLLNVISAPKVGSVISQGINIGACSGGVCGGQTGL YSNGSIVALTDSTFQLGEQVRYGTRHLNLGVSTLNLGSAEALTAAAAANRLPAGLTLSQA LLDRLLRGDTQFGAPALETLQLSARDGFNFYGNAVLDTYDPLTGKSLLSNLMLSTPALYG AGGANDVASIHTANLIWLGAITAPGAVVAGGAGTGSGRLDVNAERIEFGYGAFGQPSNVK SFDRLALGFANVTLNASERITANHKGSLSVYQRQGAYDPVSGFQYSGGNLTIRTPLMTGE AGSVNVIKAGGAIDIGASAGPRGTASGQGAELSLQGESIRVASAVVLPSGKVSLSARGDV MLTDDALIDVAGRAIPFNDVTQYGWGGDVLLDSRSGNILQAAGSTIDLSAKHNQAGKLRA VATDAAGGIVDLQGKILGSSSGHYLAGGTSIPYLAGTVEIQAQRLGSSGALDQQFADLNQ RLNNGEVFGARSFQLKQGDLTIGNGLKAGTISVSVDNGSLRVKGLVDASGERVGSINLAG KNGLTLDSTAVLDAHGSKLRVDSYGKIIDAPNRASVVLGSGTGQLTLADGVRIDLRHGTD GAAGNDGRNRGTLALNAPRLFNPDGSSNDINIDASGRLTVQGARSITLNGMATYDDAPEK TDPTASGRPYQEITQGYLDGKHALSEAFINAAKNNLNLLNNKLAGLNNATYADAFHLRPG VEIVSKTPDGDLVVQGDLDLSGYRYASLNPNSQKDNSIYGSGESGSLTLRAGGDLNIYGS INDGFAKPPVSEDDKGWVLLPGVDFSGGNIVVPGNGVTLADGTAFPAGATLNYDLPIKGL TVAAGTRLPVVATLAQDLVLPAGSVLSADVRDGSGNLLFAAGTLLSQAQTLVAGTQLGAG MLLTEGTRLQAMTWPKGVPLPTVHGATLANNSVLLSGNKALPKGGLIPAGTDVKLPNGAT SVQLRVGVSGAAGQVWAISPMLAEGTQSWSLRLVAGADTEAADSRILQAHPRSGEILLAD NHYGMFAKEMPAKGVQTWTAQAVIDMGFAGVVVKEGDPIDQAVLDGFGLGSIEDFCAATP EYCKPKVTYVFTQYAADDLANNGINVVVGTEMTDAFFQSIGYPSVEEVCATAPDYCLLKA DKEYAAVPSSTRFSVIRTGTGDLELLSAGSLSMDSLYGVYTAGTSSTGTFAGDPYNLPKA KPAGADPAAKTVLNDTGSFFEKFVNGSPTSIYRAWYPEAGGNLTLTVGGDLTGNITSVTG LNPARPNPRDAGVDSAAVGNWLWRQGSSDVATGGQAQPTAWWINFGSYTATTAADKLLGF TGFGALGGGNVDVDVSGNAGVLNTLGYSTQHVEANPHSQGLVLAVGSTGRVASDGSLQLT GGGDLRVRIGGALNPASVADSGDHRDGVLVNLRGDVQLRSATVGSVDVMYGSVAGVQSPG ETRAYDPLVATRGVARGGMTLVPGDATFNLQTLGDLVVQNVEDPGRVVLSHLSPFAQGAE QGTGTSWFTLWTKGTSIDLFSLGGNLTPFSRSDATADLAVVYPSIVRATAASGSLYYGKA AQAQANGDNNYTYPLLLAPGENGQLQFMAQDSIYAGGMTVSQSGTAQSTTATPWHPAYQG RIGNAVKASNLSVNGNSGSQPLFVFGPGTAALSPGGSAEPARFYAIDGDLVGVSSGRVIA FGTTVGSLHEGQTWYEGNGSVWMMAGRDIVSSGRRFGQDSLAVAGMRTQDNLIIHDNPND ISVVSAGRDILYSNFQVAGPGLLELSAGRNILLSGSGALGESSVTSLGPLLAGDNRPGAS IVMQAGVGPHGPDYLRFVEAYLNPVNLAQPGESIQGNKVAKTYENELVTWLAERFGFVGD TAQARAYYVALPAEQQRVFARDLYFAELKAAGREYNTDGSVRQGSYLRGRAAIAALFPDK DVAGNPIAYTGDITLFGGSGVHTNFGGSIQMLTPGGSQTFGIEGEAPPSTAGVITQGAGD IQLYSMGSILLGQSRIMTTFGGSIMGWTSEGDINAGRGSKTTVVYTPPKRVYDNWGNVAL SPSVPSTGAGIATLNPIPEVPAGDIDLIAPLGTIDAGEAGIRVSGNVNIAALRVVNAANI QSQGKSSGVPVSAAVNTNAMTSASAAGAAASQAAEDAARSQQAAAKQGRPSIMTVEVLSL GNEPLPQEPAPAQKTSGYNPDSPVQVLGAGPLSEQARARLTEEERKQISL