Protein Info for GFF1910 in Xanthobacter sp. DMC5

Annotation: putative sulfoacetate transporter SauU

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 402 transmembrane" amino acids 17 to 41 (25 residues), see Phobius details amino acids 50 to 75 (26 residues), see Phobius details amino acids 94 to 121 (28 residues), see Phobius details amino acids 142 to 163 (22 residues), see Phobius details amino acids 171 to 190 (20 residues), see Phobius details amino acids 211 to 231 (21 residues), see Phobius details amino acids 251 to 276 (26 residues), see Phobius details amino acids 289 to 307 (19 residues), see Phobius details amino acids 313 to 331 (19 residues), see Phobius details amino acids 348 to 371 (24 residues), see Phobius details amino acids 377 to 397 (21 residues), see Phobius details PF07690: MFS_1" amino acids 22 to 241 (220 residues), 98.4 bits, see alignment E=2.1e-32 amino acids 237 to 401 (165 residues), 60.2 bits, see alignment E=8.7e-21

Best Hits

KEGG orthology group: None (inferred from 74% identity to xau:Xaut_2519)

Predicted SEED Role

"Fosmidomycin resistance protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (402 amino acids)

>GFF1910 putative sulfoacetate transporter SauU (Xanthobacter sp. DMC5)
MSIEARAARWPAAEVSSIGAVCSAHFCSHFLQLALAPLFIMMRADLQVSFIELGLVLSVF
YLFSGGGQVAAGVLVDRFGADRLLLAGILTQGAATAAMGFAPTYLLLLPLAALAGLGNSV
YHPADLSILSHKVAAPRLGRAFAAHVIAGSVGFGLSPIVSAAIGAHFGWRTALIAMGLLV
LLVGLLLAVFRRPLRAPAGRAVHAAAGGAPLSFLQVLAMPVVLMAFLYFTLTSVALSGLQ
SFSIVALQEGFGAAVALATLAVALFQVGNTAGVAIGGHVADRSAQHHQIAMGGLAAAAVF
GFLAAWLQAAPEVTVGLIALVGFFMGLTTPSRDVLVRGAAPAGATGKVFGIVYSGFDIGS
LVGPLLFGLMLDHHHPRMVIAGAAAALALAVGTAFAVRRRPD