Protein Info for GFF1910 in Sphingobium sp. HT1-2

Annotation: Decaprenyl diphosphate synthase (EC 2.5.1.91)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00348: polyprenyl_synt
  • amino acids 48 to 291 (244 residues), 241.3 bits, E=5e-76

Best Hits

KEGG orthology group: K02523, octaprenyl-diphosphate synthase [EC: 2.5.1.90] (inferred from 93% identity to sch:Sphch_1399)

Predicted SEED Role

No annotation

MetaCyc Pathways

• polyisoprenoid biosynthesis (E. coli) (5/5 steps found)
• octaprenyl diphosphate biosynthesis (1/1 steps found)
• superpathway of chorismate metabolism (41/59 steps found)
• superpathway of ubiquinol-8 biosynthesis (early decarboxylation) (7/12 steps found)
• superpathway of menaquinol-8 biosynthesis I (5/10 steps found)
• superpathway of demethylmenaquinol-8 biosynthesis I (4/9 steps found)
• superpathway of menaquinol-8 biosynthesis III (2/9 steps found)
• superpathway of menaquinol-8 biosynthesis II (2/10 steps found)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.5.1.90

Protein Sequence (341 amino acids)

>GFF1910 Decaprenyl diphosphate synthase (EC 2.5.1.91) (Sphingobium sp. HT1-2)
MTASSPGNVHPIGRTNAPSLAPIMALVADGMNQVNSVILDRMQSRIPLIPELAGHLIAGG
GKRLRPMLTLACADLVGYAGSRHYKLAASVEFIHTATLLHDDVVDGSGLRRGRKTANIIW
GNSASVLVGDFLFSRSFELMVEAESLKVLKILSGASAIIAEGEVNQLTAQRKIDTSEEQY
LDIIGAKTAALFAAACRISAVVADRSEAEEHALDVYGRNLGIAFQLIDDAIDYESDGATM
GKDAGDDFRDGKVTLPVILAYARGSDEDKAFWKAAISGHRISDEDLAHATQLLRQTGAIA
DTLARARHYGQRAIDALGMFDAGKAKAALTEAVEFAIARAY