Protein Info for PS417_08850 in Pseudomonas simiae WCS417

Annotation: beta (1-6) glucans synthase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 517 transmembrane" amino acids 9 to 29 (21 residues), see Phobius details amino acids 320 to 340 (21 residues), see Phobius details amino acids 347 to 367 (21 residues), see Phobius details amino acids 379 to 399 (21 residues), see Phobius details amino acids 419 to 438 (20 residues), see Phobius details amino acids 444 to 462 (19 residues), see Phobius details amino acids 469 to 486 (18 residues), see Phobius details amino acids 494 to 512 (19 residues), see Phobius details PF00332: Glyco_hydro_17" amino acids 233 to 308 (76 residues), 30.2 bits, see alignment E=1.9e-11

Best Hits

KEGG orthology group: None (inferred from 94% identity to pfs:PFLU1811)

Predicted SEED Role

"probable glucosyl transferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1N7UCU2 at UniProt or InterPro

Protein Sequence (517 amino acids)

>PS417_08850 beta (1-6) glucans synthase (Pseudomonas simiae WCS417)
MPATARFPALPYCFALILGLLALFAYWYGLGRPVVLPDVASATHKMQCASYTPFDKDQSP
FDQPFALRPERMDADLALLATRFECIRTYSMTGLEALPDMARKHGLKVMAGAWVSSDPVA
TAKEIDELIASANAHPDVVTAVIVGNEALLRKEVTAAQLVKLIQTVKSQIKQPVTYADVW
EFWLQHPEIAPAVDFLTIHLLPYWEDDPSGIDQALKHVGDVRQTFGNKFAPKDILIGETG
WPSEGRQRETAVPSRVNEAKFMRGFVAMAEANGWHYNLIEAFDQPWKRASEGAVGGYWGL
FDADRQDKGILAGPVTNVPYWPLWLGVGGIILLGTLVLGGRVRSPRAAIALPLLGAVAAC
SIGTWAELTRVTARFNDEWVWAGLLLVLNLLVLAHAALALSAREGWRERAFDWLEQRAGW
LVAIAGFAGAVMMLTLVFDPRYRSFPSAALLLPALVYLVRPVTGPRREIALLAFIIGAGV
APQLYREGLLNQQAWGWAMVSLLMVAALWRCLRVRKA