Protein Info for PS417_07390 in Pseudomonas simiae WCS417

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1169 PF22303: OspG_kinase" amino acids 1048 to 1142 (95 residues), 41.3 bits, see alignment E=8.5e-15

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1N7U8P7 at UniProt or InterPro

Protein Sequence (1169 amino acids)

>PS417_07390 hypothetical protein (Pseudomonas simiae WCS417)
MTTLNSPVVYTQPLVLPNSAAPPVALQRQGGTAATDAPVPKPSSALQKALGDRCNQLALA
QSLQRLIQDLTQQLVPDESASKARKRMETALASHLKSTTLFVCEDSSWPGPTLPENRMVS
LEDYLLGCGLQVPKTLEALVTLKDSSVLQAQVHPLGNLSGALSWPQPMASNDQEAVLALL
QSNASGLPGLPLAEREKGALGYLMSGSAVSEADLKTPIVAMEKLLGSPKAQALGQAIQSR
LEGIPTGVANNDYVLTAIHLGLDPESQADPARNSVAGYDLARSQHWGQPATVVIEGLGKH
LVEKGRANAQTAPLAAYLLLARTAPEYLVKDIPASVTYGSVLWAQLAMAVARIEAQTPGR
TLGMGYAEILLGAETLPVDEELCQQIDYQALKDWGTVNGLLIDTEEAPSASAMERVRTAF
NSHLSSLKTTSDALQTAIPSRSAMGIAQLQAAFPELDPRLFEVKNIQKARLKEGRPGVYP
GMRSMLDIVMEGGALGPEDHWVSNDKRLPVDKFCNLYWAGKLGVATPFKTAYDSAIQAQG
EGQQGLVRHLISTLPLEDRKNLEFGKLEFFHTHQYKIAGDLFTPPALHVRGHTLEVKATQ
TNGQVDIYLIDTRQGSIEKQNFLKRRRTEPYTADKMEERDANILSRTALFEPGNDKPARR
FLAQPEGTQPPDSFNSERSHAIADVFVKSLDLKNDDLLNEARGMTSFDQDSARNEAIAEF
FRSLIPLRSAIVNFKHGNVGQGLFDLALDVVGLVTLGAGKAAQAGKVLGKGLSTASQAAK
AARFIGAKVVEAFNPLSGIGELLVGGGRLAVGGGRYLVRQFNVLRGTAGGYDLLKAASKQ
HGDAAIGVFKVAGENVEGVAVQHRSKWYALDTQTMRPYDRPIHDFAPGVRAVDGKITHLP
TVPEGELSNGMFRQFSVPRSRITGLSRNSQGVYVAADGHLSHIRHTDGSGRTALYEVRQV
ARTADGKVQARVYHNNRQTGLLVEHVQGDQWRRLGLQGGAPTSIKADCGPVIGRGGEGVV
YASLDGKRAYKDLGPTRYTPSDNIELSDVQYLNKYYGDGFARTIVEDGRRYLVMGRIEGV
DLAHINKNSLPPEARSLLADTFAEMEAKDIYHNDLQLKNFMYSANDNKIYPVDMDALSSE
FMVSFLMQDYERKKQRLLKQYAALVAKAP